WormBase Tree Display for Gene: WBGene00002125

WBGene00002125 SMap: S_parent: Sequence: F22F4
  Identity: Version: 1
    Name: CGC_name: inx-3 Person_evidence: WBPerson247
      Sequence_name: F22F4.2
      Molecular_name: F22F4.2
        F22F4.2.1
        CE33055
      Other_name: opu-3
        CELE_F22F4.2 Accession_evidence: NDB BX284606
      Public_name: inx-3
    DB_info: Database: AceView gene XG615
        WormQTL gene WBGene00002125
        WormFlux gene WBGene00002125
        NDB locus_tag CELE_F22F4.2
        Panther gene CAEEL|WormBase=WBGene00002125|UniProtKB=Q19746
          family PTHR11893
        NCBI gene 180866
        RefSeq protein NM_076601.7
        SwissProt UniProtAcc Q19746
        UniProt_GCRP UniProtAcc Q19746
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: inx
    Allele (31)
    Legacy_information: [Barnes TM] opu for OPUS protein.
    Strain: WBStrain00035658
      WBStrain00007118
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (46)
    Paralog (24)
    Structured_description: Automated_description: Enables actin filament binding activity and gap junction channel activity. Involved in embryonic morphogenesis and positive regulation of pharyngeal pumping. Located in cytoplasm and gap junction. Expressed in several structures, including arcade cell; cephalic sheath cell; neurons; pharyngeal cell; and rectum. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F22F4.2
    Corresponding_CDS_history: F22F4.2:wp92
    Corresponding_transcript: F22F4.2.1
    Other_sequence (47)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00027681 Inferred_automatically: RNAi_primary
      WBRNAi00092183 Inferred_automatically: RNAi_primary
      WBRNAi00062020 Inferred_automatically: RNAi_primary
      WBRNAi00027295 Inferred_automatically: RNAi_primary
      WBRNAi00025189 Inferred_automatically: RNAi_primary
      WBRNAi00066626 Inferred_automatically: RNAi_primary
      WBRNAi00013776 Inferred_automatically: RNAi_primary
      WBRNAi00066688 Inferred_automatically: RNAi_primary
      WBRNAi00045349 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Drives_construct: WBCnstr00000925
      WBCnstr00010537
      WBCnstr00010849
      WBCnstr00013438
      WBCnstr00016939
      WBCnstr00036434
    Construct_product: WBCnstr00010849
      WBCnstr00036434
      WBCnstr00038753
    Antibody: WBAntibody00000617
    Microarray_results: SMD_F22F4.2
      175724_s_at
      192259_s_at
      A_12_P111401
      A_12_P148965
      Aff_F22F4.2
      GPL13394_WBGene00002125
      GPL13914_F22F4.2
      GPL14144_F22F4.2_1159-1218_0.949_1_A
      GPL14144_F22F4.2_804-863_0.931_7_C
      GPL14144_F22F4.2_990-1049_0.941_3_B
      GPL19516_CGZ0017593
      GPL21109_F22F4.2
      GPL3518_CE07127
      GPL8304_CE_WBGene00002125_A
      GPL8304_CE_WBGene00002125_B
      GPL8673_F22F4_2P00414
      GPL8673_F22F4_2P00866
      GPL8673_F22F4_2P00998
      GPL9450_F22F4.2
      cea2.p.142127
    Expression_cluster (275)
    Interaction (150)
  Map_info: Map: X Position: -3.91398 Error: 0.016666
    Positive: Positive_clone: F22F4 Person_evidence: WBPerson43
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4443
        4456
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene