WormBase Tree Display for Gene: WBGene00002125

WBGene00002125 SMap: S_parent: Sequence: F22F4
  Identity: Version: 1
    Name: CGC_name: inx-3 Person_evidence: WBPerson247
      Sequence_name: F22F4.2
      Molecular_name: F22F4.2
        F22F4.2.1
        CE33055
      Other_name: opu-3
        CELE_F22F4.2 Accession_evidence: NDB BX284606
      Public_name: inx-3
    DB_info: Database: AceView gene XG615
        WormQTL gene WBGene00002125
        WormFlux gene WBGene00002125
        NDB locus_tag CELE_F22F4.2
        Panther gene CAEEL|WormBase=WBGene00002125|UniProtKB=Q19746
          family PTHR11893
        NCBI gene 180866
        RefSeq protein NM_076601.7
        SwissProt UniProtAcc Q19746
        UniProt_GCRP UniProtAcc Q19746
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: inx
    Allele (31)
    Legacy_information: [Barnes TM] opu for OPUS protein.
    Strain: WBStrain00035658
      WBStrain00007118
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog: WBGene00051589 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035187 Caenorhabditis briggsae From_analysis: Hillier-set
            OMA
            WormBase-Compara
      WBGene00035203 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00163856 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00096404 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00126874 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223788 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3342 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2799 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g9988 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g9989 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g9990 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21956 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10628 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2595 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16061 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g203 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10390 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7226 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13990 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00002.g178 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-inx-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold626.g6541 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00083.g3719 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00430 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024501 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00547 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14549 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0231710 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19150 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242562 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00090526 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090527 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276673 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276680 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259040 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00259733 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261600 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261759 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00266204 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0027108 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0027106 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0085387 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0265274 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0004646 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0024177 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
    Paralog (24)
    Structured_description: Automated_description: Enables actin filament binding activity and gap junction channel activity. Involved in embryonic morphogenesis and positive regulation of pharyngeal pumping. Located in cytoplasm and gap junction. Expressed in several structures, including arcade cell; cephalic sheath cell; neurons; pharyngeal cell; and rectum. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F22F4.2
    Corresponding_CDS_history: F22F4.2:wp92
    Corresponding_transcript: F22F4.2.1
    Other_sequence (47)
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00027681 Inferred_automatically: RNAi_primary
      WBRNAi00092183 Inferred_automatically: RNAi_primary
      WBRNAi00062020 Inferred_automatically: RNAi_primary
      WBRNAi00027295 Inferred_automatically: RNAi_primary
      WBRNAi00025189 Inferred_automatically: RNAi_primary
      WBRNAi00066626 Inferred_automatically: RNAi_primary
      WBRNAi00013776 Inferred_automatically: RNAi_primary
      WBRNAi00066688 Inferred_automatically: RNAi_primary
      WBRNAi00045349 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Drives_construct: WBCnstr00000925
      WBCnstr00010537
      WBCnstr00010849
      WBCnstr00013438
      WBCnstr00016939
      WBCnstr00036434
    Construct_product: WBCnstr00010849
      WBCnstr00036434
      WBCnstr00038753
    Antibody: WBAntibody00000617
    Microarray_results (21)
    Expression_cluster (275)
    Interaction (150)
  Map_info: Map: X Position: -3.91398 Error: 0.016666
    Positive: Positive_clone: F22F4 Person_evidence: WBPerson43
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4443
        4456
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene