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WormBase Tree Display for Gene: WBGene00002220

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Name Class

WBGene00002220SMapS_parentSequenceC15C7
IdentityVersion2
NameCGC_namegcc-1Paper_evidenceWBPaper00046586
Person_evidenceWBPerson298
Sequence_nameC15C7.2
Molecular_nameC15C7.2
C15C7.2.1
CE38486
Other_nameklp-8Person_evidenceWBPerson589
CELE_C15C7.2Accession_evidenceNDBBX284606
Public_namegcc-1
DB_infoDatabaseAceViewgeneXD781
WormQTLgeneWBGene00002220
WormFluxgeneWBGene00002220
NDBlocus_tagCELE_C15C7.2
PanthergeneCAEEL|WormBase=WBGene00002220|UniProtKB=Q18013
familyPTHR23157
NCBIgene180606
RefSeqproteinNM_076142.8
TREEFAMTREEFAM_IDTF318590
TrEMBLUniProtAccQ18013
UniProt_GCRPUniProtAccQ18013
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:27WBPerson1971EventImportedInitial conversion from geneace
225 Mar 2015 16:36:59WBPerson2970Name_changeCGC_namegcc-1
Other_nameklp-8
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDSC15C7.2
Corresponding_CDS_historyC15C7.2:wp142
Corresponding_transcriptC15C7.2.1
Other_sequenceTcir_isotig22567
CBC16867_1
Tcir_isotig17360
Associated_featureWBsf647918
WBsf662582
WBsf662583
WBsf1004533
WBsf1004534
WBsf1004535
WBsf1022574
WBsf1022575
WBsf235455
Experimental_infoRNAi_resultWBRNAi00040595Inferred_automaticallyRNAi_primary
WBRNAi00010783Inferred_automaticallyRNAi_primary
Expr_patternChronogram1422
Expr4831
Expr5269
Expr15134
Expr1012456
Expr1031299
Expr1144650
Expr2011960
Expr2030197
Drives_constructWBCnstr00002705
WBCnstr00004401
WBCnstr00012262
WBCnstr00037959
Construct_productWBCnstr00037959
Microarray_results (19)
Expression_clusterWBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_embryo_enriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_embryo_enriched
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_downregulated
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061527:nrde-3-tra-4_10484
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062590:Aging_upregulated_intestine
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00025032:cluster_7
WBPaper00025032:cluster_185
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_F
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00048989:N2_rapamycin_downregulated
InteractionWBInteraction000030969
WBInteraction000216603
WBInteraction000320396
WBInteraction000362652
WBInteraction000512401
WBInteraction000543034
Map_infoMapXPosition-11.9123Error0.110758
PositivePositive_cloneC15C7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Y43F4
Pseudo_map_position
ReferenceWBPaper00010295
WBPaper00018069
WBPaper00018596
WBPaper00019563
WBPaper00030963
WBPaper00038491
WBPaper00046586
RemarkSequence connection from [Siddiqui SS], 02/06/11 krb.
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
C15C7.2, based on sequence similarity and subcellular localization is a GRIP domain containing Trans-Golgi Network protein of the Golgin family, not a kinesin; thus klp-8 is not an appropriate namePaper_evidenceWBPaper00046586
MethodGene