WormBase Tree Display for Gene: WBGene00002239

WBGene00002239 SMap: S_parent: Sequence: F13B9
  Identity: Version: 1
    Name: CGC_name: ksr-1 Person_evidence: WBPerson237
      Sequence_name: F13B9.5
      Molecular_name: F13B9.5
        F13B9.5.1
        CE25854
      Other_name: sur-3
        sar-2
        CELE_F13B9.5 Accession_evidence: NDB BX284606
      Public_name: ksr-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:27 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ksr
    Allele (175)
    Legacy_information: [Kornfeld K] ksr for kinase suppressor of ras. ksr-1 loss-of-function mutations suppress the multivulva phenotype caused by let-60(n1046gf), cause a very low penetrance defect in vulval lineages, and cause about 10% larval lethality with a characteristic rod-like morphology.
      [C.elegansII] pka sur-3, sar-2. Mutations suppress ras mutation,let-60(n1046gf). No phenotype alone in VPC; some larval lethality, Egl and Mig phenotypes. [MT; MH]
    Strain: WBStrain00026498
      WBStrain00026503
      WBStrain00027335
      WBStrain00027336
      WBStrain00027337
      WBStrain00031627
    RNASeq_FPKM (74)
    GO_annotation (25)
    Ortholog: WBGene00058806 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00041222 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154476 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126881 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115552 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223588 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2694 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g164 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18495 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20834 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23074 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11994 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3915 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9032 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9083 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2664 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00383.g10074 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g25559 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10181 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00093.g4067 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01981 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025345 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04763 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22590 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0160400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19547 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245774 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262832 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297829 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300945 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0015402 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-040724-45 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-030131-8047 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-091113-34 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:6465 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:18610 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:105051 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:3610315 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1562674 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1308105 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog (11)
    Structured_description (2)
  Disease_info: Potential_model: DOID:3458 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6465)
      DOID:1612 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6465)
  Molecular_info: Corresponding_CDS: F13B9.5
    Corresponding_transcript: F13B9.5.1
    Other_sequence (19)
    Associated_feature: WBsf663032
      WBsf1006098
      WBsf1006099
      WBsf1006100
      WBsf1023389
      WBsf1023390
      WBsf236034
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1011978
      Expr1031314
      Expr1148436
      Expr2012981
      Expr2031213
    Drives_construct: WBCnstr00036367
    Construct_product: WBCnstr00036367
    Microarray_results (25)
    Expression_cluster (96)
    Interaction (99)
    WBProcess: WBbiopr:00000071
  Map_info: Map: X Position: -0.200671 Error: 0.016778
    Well_ordered
    Positive: Positive_clone: C33E9 Person_evidence: WBPerson341
        F13B9 Person_evidence: WBPerson341
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 3616
        4468
  Reference (102)
  Method: Gene