WormBase Tree Display for Gene: WBGene00002889
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| WBGene00002889 | SMap | S_parent | Sequence | F20H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | let-765 | Paper_evidence | WBPaper00036029 | |||||
| Person_evidence | WBPerson533 | ||||||||
| Sequence_name | F20H11.2 | ||||||||
| Molecular_name | F20H11.2 | ||||||||
| F20H11.2.1 | |||||||||
| CE45139 | |||||||||
| Other_name | let-745 | ||||||||
| nsh-1 | Person_evidence | WBPerson625 | |||||||
| CELE_F20H11.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | let-765 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00002889 | |||||
| WormFlux | gene | WBGene00002889 | |||||||
| NDB | locus_tag | CELE_F20H11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002889|UniProtKB=O01737 | |||||||
| family | PTHR12706 | ||||||||
| NCBI | gene | 175934 | |||||||
| RefSeq | protein | NM_066054.6 | |||||||
| SwissProt | UniProtAcc | O01737 | |||||||
| TREEFAM | TREEFAM_ID | TF313526 | |||||||
| UniProt_GCRP | UniProtAcc | O01737 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:29 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 09 Apr 2010 13:43:20 | WBPerson2970 | Event | Acquires_merge | WBGene00003819 | ||||
| Name_change | Other_name | nsh-1 | |||||||
| 3 | 24 Jun 2010 13:32:00 | WBPerson1867 | Event | Acquires_merge | WBGene00017649 | ||||
| Acquires_merge | WBGene00003819 | ||||||||
| WBGene00017649 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | let | ||||||||
| Allele (96) | |||||||||
| Legacy_information | [Stewart HI] homozygotes arrest at early larval stage | ||||||||
| [Stewart HI] homozygotes arrest at mid larval stage | |||||||||
| [C.elegansII] s2575 : early larval lethal, L2 arrest with lineage abnormalities; in males, B.a and B.p equal in size. s2575/Dfarrests at L1. OA1: s2630 (pka let-745, midlarval lethal). [BC] | |||||||||
| Strain | WBStrain00003530 | ||||||||
| WBStrain00036743 | |||||||||
| WBStrain00000813 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP3392 | ||||||||
| Ortholog (45) | |||||||||
| Structured_description | Automated_description | Predicted to enable chromatin DNA binding activity and histone binding activity. Involved in several processes, including nematode male tail tip morphogenesis; positive regulation of Ras protein signal transduction; and vulval cell fate specification. Located in nucleus. Expressed in several structures, including P3.pa; P3.pp; P4.pa; P5.ppp; and P7.paa. Is an ortholog of human SBNO1 (strawberry notch homolog 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20H11.2 | |||||||
| Corresponding_CDS_history | F20H11.2:wp216 | ||||||||
| Corresponding_transcript | F20H11.2.1 | ||||||||
| Other_sequence (50) | |||||||||
| Associated_feature (20) | |||||||||
| Experimental_info | RNAi_result (46) | ||||||||
| Expr_pattern | Chronogram822 | ||||||||
| Expr9006 | |||||||||
| Expr9007 | |||||||||
| Expr1031370 | |||||||||
| Expr1149090 | |||||||||
| Expr2013076 | |||||||||
| Expr2031308 | |||||||||
| Drives_construct | WBCnstr00004594 | ||||||||
| WBCnstr00005998 | |||||||||
| WBCnstr00008396 | |||||||||
| Construct_product | WBCnstr00005998 | ||||||||
| WBCnstr00008397 | |||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | III | Position | -1.06077 | Error | 0.002588 | |||
| Positive | Inside_rearr | sDf125 | |||||||
| sDp3 | |||||||||
| sDp8 | |||||||||
| Positive_clone | F20H11 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | |||||||||
| Negative | Outside_rearr | sDf121 | |||||||
| sDf135 | |||||||||
| Mapping_data | Multi_point | 3297 | |||||||
| 3298 | |||||||||
| 3299 | |||||||||
| 3300 | |||||||||
| 3301 | |||||||||
| 3302 | |||||||||
| 3332 | |||||||||
| Pos_neg_data | 8679 | ||||||||
| 8769 | |||||||||
| 8785 | |||||||||
| 8794 | |||||||||
| 9250 | |||||||||
| 9251 | |||||||||
| 9252 | |||||||||
| 9253 | |||||||||
| Reference (11) | |||||||||
| Remark | RENAMED LET-745 TO LET-765. | ||||||||
| Moved from -0.995 [sdm/jah 5/99] | |||||||||
| Method | Gene |
