WormBase Tree Display for Gene: WBGene00003055
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| WBGene00003055 | SMap | S_parent | Sequence | F48E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lon-1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F48E8.1 | ||||||||
| Molecular_name | F48E8.1a | ||||||||
| F48E8.1a.1 | |||||||||
| CE01953 | |||||||||
| F48E8.1b | |||||||||
| CE29046 | |||||||||
| F48E8.1c | |||||||||
| CE54061 | |||||||||
| F48E8.1b.1 | |||||||||
| F48E8.1c.1 | |||||||||
| Other_name | F48C8.1 | Paper_evidence | WBPaper00005747 | ||||||
| CELE_F48E8.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | lon-1 | ||||||||
| DB_info | Database | AceView | gene | 3G567 | |||||
| WormQTL | gene | WBGene00003055 | |||||||
| WormFlux | gene | WBGene00003055 | |||||||
| NDB | locus_tag | CELE_F48E8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003055|UniProtKB=Q09566 | |||||||
| family | PTHR10334 | ||||||||
| NCBI | gene | 175753 | |||||||
| RefSeq | protein | NM_065766.7 | |||||||
| NM_001379712.2 | |||||||||
| NM_065765.9 | |||||||||
| SwissProt | UniProtAcc | Q09566 | |||||||
| TrEMBL | UniProtAcc | Q8MQ33 | |||||||
| H2L058 | |||||||||
| UniProt_GCRP | UniProtAcc | Q09566 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lon | ||||||||
| Reference_allele | WBVar00143019 | ||||||||
| Allele (67) | |||||||||
| Legacy_information | See also n1130 | ||||||||
| [C.elegansII] e185 : about 50% longer than wildtype at all stages, markedly tapering tail and head; low penetrance tendency to form constriction behind head, may result in auto-decapitation. Eggs elongated.ES3. Male bursa elongated ME0. OA5: e43, e1820, n1130 etc. (some have stronger Lon phenotype than e185, all show some decapitation). [Brenner 1974; MT] | |||||||||
| Strain (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (24) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Concise_description | The lon-1 gene encodes a protein belonging to the PR-protein superfamily that is a target of DBL-1 (TGF-beta) signaling, and that regulates polyploidization and body length. | Paper_evidence | WBPaper00005152 | |||||
| WBPaper00005325 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 12 Mar 2009 00:00:00 | ||||||||
| Automated_description | Involved in several processes, including negative regulation of BMP signaling pathway; negative regulation of DNA endoreduplication; and positive regulation of growth rate. Located in adherens junction and plasma membrane. Expressed in head; hypodermis; intestinal cell; intestine; and tail. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48E8.1a | |||||||
| F48E8.1b | |||||||||
| F48E8.1c | |||||||||
| Corresponding_CDS_history | F48E8.1c:wp275 | ||||||||
| Corresponding_transcript | F48E8.1a.1 | ||||||||
| F48E8.1b.1 | |||||||||
| F48E8.1c.1 | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf645171 | ||||||||
| WBsf992398 | |||||||||
| WBsf992399 | |||||||||
| WBsf992400 | |||||||||
| WBsf992401 | |||||||||
| WBsf992402 | |||||||||
| WBsf1014890 | |||||||||
| WBsf1014891 | |||||||||
| WBsf224932 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Chronogram2049 | ||||||||
| Expr1831 | |||||||||
| Expr1922 | |||||||||
| Expr1020935 | |||||||||
| Expr1151582 | |||||||||
| Expr2013243 | |||||||||
| Expr2031474 | |||||||||
| Drives_construct | WBCnstr00000300 | ||||||||
| WBCnstr00000303 | |||||||||
| WBCnstr00001285 | |||||||||
| WBCnstr00002101 | |||||||||
| WBCnstr00005426 | |||||||||
| WBCnstr00036260 | |||||||||
| Construct_product | WBCnstr00001285 | ||||||||
| WBCnstr00036260 | |||||||||
| Antibody | WBAntibody00001847 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (229) | |||||||||
| Interaction (136) | |||||||||
| Anatomy_function | WBbtf0104 | ||||||||
| WBbtf0105 | |||||||||
| WBProcess | WBbiopr:00000025 | ||||||||
| Map_info | Map | III | Position | -1.6279 | Error | 0.012051 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr (2) | ||||||||
| Positive_clone | F48E8 | Person_evidence | WBPerson465 | ||||||
| Author_evidence | Shetgiri P | ||||||||
| Krishna S | |||||||||
| Savage C | |||||||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Negative | Outside_rearr | tDf10 | |||||||
| Mapping_data | 2_point (17) | ||||||||
| Multi_point (91) | |||||||||
| Pos_neg_data | 803 | ||||||||
| 1590 | |||||||||
| 8692 | |||||||||
| 8733 | |||||||||
| 8737 | |||||||||
| 8774 | |||||||||
| 10255 | |||||||||
| Landmark_gene | |||||||||
| Reference (103) | |||||||||
| Remark | Sequence connection from [Morita Y, Leroi AM, Ueno N], 02/06/11 krb. | ||||||||
| Method | Gene |
