WormBase Tree Display for Gene: WBGene00003056
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| WBGene00003056 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lon-2 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C39E6.1 | ||||||||
| Molecular_name | C39E6.1 | ||||||||
| C39E6.1.1 | |||||||||
| CE35426 | |||||||||
| Other_name | CELE_C39E6.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | lon-2 | ||||||||
| DB_info | Database | AceView | gene | XF356 | |||||
| WormQTL | gene | WBGene00003056 | |||||||
| WormFlux | gene | WBGene00003056 | |||||||
| NDB | locus_tag | CELE_C39E6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003056|UniProtKB=Q18530 | |||||||
| family | PTHR10822 | ||||||||
| NCBI | gene | 180750 | |||||||
| RefSeq | protein | NM_076411.8 | |||||||
| TREEFAM | TREEFAM_ID | TF353541 | |||||||
| TrEMBL | UniProtAcc | Q18530 | |||||||
| UniProt_GCRP | UniProtAcc | Q18530 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lon | ||||||||
| Reference_allele | WBVar00143398 | ||||||||
| Allele | WBVar00143398 | Inferred_automatically | From strain object: AF1 | ||||||
| From strain object: BW1118 | |||||||||
| From strain object: CB2198 | |||||||||
| From strain object: CB2199 | |||||||||
| From strain object: CB2217 | |||||||||
| From strain object: CB2238 | |||||||||
| From strain object: CB2620 | |||||||||
| From strain object: CB3253 | |||||||||
| From strain object: CB3270 | |||||||||
| From strain object: CB3271 | |||||||||
| From strain object: CB3273 | |||||||||
| From strain object: CB3274 | |||||||||
| From strain object: CB3275 | |||||||||
| From strain object: CB3276 | |||||||||
| From strain object: CB3475 | |||||||||
| From strain object: CB3533 | |||||||||
| From strain object: CB5042 | |||||||||
| From strain object: CB5310 | |||||||||
| From strain object: CB678 | |||||||||
| From strain object: CB7538 | |||||||||
| From strain object: CGC28 | |||||||||
| From strain object: CGC35 | |||||||||
| From strain object: CGC40 | |||||||||
| From strain object: CGC41 | |||||||||
| From strain object: CGC46 | |||||||||
| From strain object: CGC50 | |||||||||
| From strain object: CGC79 | |||||||||
| From strain object: CGC97 | |||||||||
| From strain object: CS624 | |||||||||
| From strain object: DA1077 | |||||||||
| From strain object: DA1096 | |||||||||
| From strain object: DA438 | |||||||||
| From strain object: DA658 | |||||||||
| From strain object: DA742 | |||||||||
| From strain object: DR112 | |||||||||
| From strain object: DR113 | |||||||||
| From strain object: DR205 | |||||||||
| From strain object: DR733 | |||||||||
| From strain object: DR921 | |||||||||
| From strain object: EE31 | |||||||||
| From strain object: EG1020 | |||||||||
| From strain object: EU307 | |||||||||
| From strain object: EU308 | |||||||||
| From strain object: EU361 | |||||||||
| From strain object: FX11552 | |||||||||
| From strain object: GE1076 | |||||||||
| From strain object: GE1386 | |||||||||
| From strain object: GE1549 | |||||||||
| From strain object: GR1028 | |||||||||
| From strain object: GR1029 | |||||||||
| From strain object: HL2000 | |||||||||
| From strain object: HR1184 | |||||||||
| From strain object: HR890 | |||||||||
| From strain object: JK323 | |||||||||
| From strain object: JM69 | |||||||||
| From strain object: KM48 | |||||||||
| From strain object: KR1115 | |||||||||
| From strain object: KR1142 | |||||||||
| From strain object: KR1537 | |||||||||
| From strain object: KR1588 | |||||||||
| From strain object: KR1594 | |||||||||
| From strain object: KR1598 | |||||||||
| From strain object: KR1692 | |||||||||
| From strain object: KR1694 | |||||||||
| From strain object: KR3910 | |||||||||
| From strain object: KR926 | |||||||||
| From strain object: LW2286 | |||||||||
| From strain object: LX677 | |||||||||
| From strain object: ML855 | |||||||||
| From strain object: MT1401 | |||||||||
| From strain object: MT1442 | |||||||||
| From strain object: MT1460 | |||||||||
| From strain object: MT1565 | |||||||||
| From strain object: MT1671 | |||||||||
| From strain object: MT1677 | |||||||||
| From strain object: MT1679 | |||||||||
| From strain object: MT1790 | |||||||||
| From strain object: MT2867 | |||||||||
| From strain object: MT3324 | |||||||||
| From strain object: MT3460 | |||||||||
| From strain object: MT455 | |||||||||
| From strain object: MT458 | |||||||||
| From strain object: MT464 | |||||||||
| From strain object: MT5439 | |||||||||
| From strain object: NG2267 | |||||||||
| From strain object: NH2693 | |||||||||
| From strain object: OH160 | |||||||||
| From strain object: PS1032 | |||||||||
| From strain object: QP122 | |||||||||
| From strain object: RE249 | |||||||||
| From strain object: RG3078 | |||||||||
| From strain object: RG3151 | |||||||||
| From strain object: RG3202 | |||||||||
| From strain object: SD1135 | |||||||||
| From strain object: SP413 | |||||||||
| From strain object: SP875 | |||||||||
| From strain object: SV411 | |||||||||
| From strain object: TP69 | |||||||||
| From strain object: TP91 | |||||||||
| From strain object: TU900 | |||||||||
| From strain object: TY1910 | |||||||||
| From strain object: TY1911 | |||||||||
| From strain object: TY1912 | |||||||||
| From strain object: TY1913 | |||||||||
| From strain object: TY1914 | |||||||||
| From strain object: TY1915 | |||||||||
| From strain object: TY1916 | |||||||||
| From strain object: TY1917 | |||||||||
| From strain object: TY404 | |||||||||
| From strain object: TY562 | |||||||||
| From strain object: TY567 | |||||||||
| From strain object: TY578 | |||||||||
| From strain object: TY714 | |||||||||
| From strain object: TY824 | |||||||||
| From strain object: VC1007 | |||||||||
| From strain object: VC1018 | |||||||||
| From strain object: VC1048 | |||||||||
| From strain object: VC1088 | |||||||||
| From strain object: VC1108 | |||||||||
| From strain object: VC1110 | |||||||||
| From strain object: VC1118 | |||||||||
| From strain object: VC1128 | |||||||||
| From strain object: VC1129 | |||||||||
| From strain object: VC1144 | |||||||||
| From strain object: VC115 | |||||||||
| From strain object: VC1155 | |||||||||
| From strain object: VC1176 | |||||||||
| From strain object: VC1246 | |||||||||
| From strain object: VC1376 | |||||||||
| From strain object: VC1434 | |||||||||
| From strain object: VC1508 | |||||||||
| From strain object: VC1513 | |||||||||
| From strain object: VC1595 | |||||||||
| From strain object: VC1599 | |||||||||
| From strain object: VC1619 | |||||||||
| From strain object: VC1680 | |||||||||
| From strain object: VC1700 | |||||||||
| From strain object: VC1703 | |||||||||
| From strain object: VC1745 | |||||||||
| From strain object: VC1782 | |||||||||
| From strain object: VC1829 | |||||||||
| From strain object: VC186 | |||||||||
| From strain object: VC1894 | |||||||||
| From strain object: VC2003 | |||||||||
| From strain object: VC2004 | |||||||||
| From strain object: VC2228 | |||||||||
| From strain object: VC2289 | |||||||||
| From strain object: VC250 | |||||||||
| From strain object: VC253 | |||||||||
| From strain object: VC2547 | |||||||||
| From strain object: VC2605 | |||||||||
| From strain object: VC2616 | |||||||||
| From strain object: VC2617 | |||||||||
| From strain object: VC2629 | |||||||||
| From strain object: VC264 | |||||||||
| From strain object: VC2640 | |||||||||
| From strain object: VC2647 | |||||||||
| From strain object: VC2659 | |||||||||
| From strain object: VC2708 | |||||||||
| From strain object: VC2739 | |||||||||
| From strain object: VC2784 | |||||||||
| From strain object: VC2835 | |||||||||
| From strain object: VC2836 | |||||||||
| From strain object: VC286 | |||||||||
| From strain object: VC2862 | |||||||||
| From strain object: VC298 | |||||||||
| From strain object: VC305 | |||||||||
| From strain object: VC3060 | |||||||||
| From strain object: VC3111 | |||||||||
| From strain object: VC3118 | |||||||||
| From strain object: VC3162 | |||||||||
| From strain object: VC3167 | |||||||||
| From strain object: VC3226 | |||||||||
| From strain object: VC3272 | |||||||||
| From strain object: VC339 | |||||||||
| From strain object: VC3454 | |||||||||
| From strain object: VC37 | |||||||||
| From strain object: VC38 | |||||||||
| From strain object: VC435 | |||||||||
| From strain object: VC466 | |||||||||
| From strain object: VC469 | |||||||||
| From strain object: VC477 | |||||||||
| From strain object: VC478 | |||||||||
| From strain object: VC479 | |||||||||
| From strain object: VC480 | |||||||||
| From strain object: VC484 | |||||||||
| From strain object: VC512 | |||||||||
| From strain object: VC538 | |||||||||
| From strain object: VC557 | |||||||||
| From strain object: VC560 | |||||||||
| From strain object: VC579 | |||||||||
| From strain object: VC639 | |||||||||
| From strain object: VC685 | |||||||||
| From strain object: VC721 | |||||||||
| From strain object: VC741 | |||||||||
| From strain object: VC756 | |||||||||
| From strain object: VC769 | |||||||||
| From strain object: VC786 | |||||||||
| From strain object: VC795 | |||||||||
| From strain object: VC796 | |||||||||
| From strain object: VC810 | |||||||||
| From strain object: VC827 | |||||||||
| From strain object: VC843 | |||||||||
| From strain object: VC844 | |||||||||
| From strain object: VC845 | |||||||||
| From strain object: VC851 | |||||||||
| From strain object: VC856 | |||||||||
| From strain object: VC857 | |||||||||
| From strain object: VC858 | |||||||||
| From strain object: VC921 | |||||||||
| From strain object: VC963 | |||||||||
| From strain object: VC970 | |||||||||
| From strain object: VT191 | |||||||||
| From strain object: VT192 | |||||||||
| From strain object: VT284 | |||||||||
| From strain object: VT333 | |||||||||
| From strain object: WM101 | |||||||||
| From strain object: XA3102 | |||||||||
| WBVar00090138 | Inferred_automatically | From strain object: MT3124 | |||||||
| WBVar00143293 | |||||||||
| WBVar00143633 | |||||||||
| WBVar00145396 | |||||||||
| WBVar00143351 | |||||||||
| WBVar00143391 | |||||||||
| WBVar01878315 | |||||||||
| WBVar01142551 | |||||||||
| WBVar01142552 | |||||||||
| WBVar01526492 | |||||||||
| WBVar01878316 | |||||||||
| WBVar01142553 | |||||||||
| WBVar00502078 | |||||||||
| WBVar01878317 | |||||||||
| WBVar01142554 | |||||||||
| WBVar00502079 | |||||||||
| WBVar01878318 | |||||||||
| WBVar00502080 | |||||||||
| WBVar01878319 | |||||||||
| WBVar01142555 | |||||||||
| WBVar00502081 | |||||||||
| WBVar01878320 | |||||||||
| WBVar01142556 | |||||||||
| WBVar01142557 | |||||||||
| WBVar00502082 | |||||||||
| WBVar01878321 | |||||||||
| WBVar00502083 | |||||||||
| WBVar01878322 | |||||||||
| WBVar01142558 | |||||||||
| WBVar01830262 | |||||||||
| WBVar01878323 | |||||||||
| WBVar01830263 | |||||||||
| WBVar00502084 | |||||||||
| WBVar01142559 | |||||||||
| WBVar01142560 | |||||||||
| WBVar00502085 | |||||||||
| WBVar01830264 | |||||||||
| WBVar01878324 | |||||||||
| WBVar01142561 | |||||||||
| WBVar01830265 | |||||||||
| WBVar01878325 | |||||||||
| WBVar02151986 | |||||||||
| WBVar00502086 | |||||||||
| WBVar01142562 | |||||||||
| WBVar01878326 | |||||||||
| WBVar00502087 | |||||||||
| WBVar00502088 | |||||||||
| WBVar01142563 | |||||||||
| WBVar01878327 | |||||||||
| WBVar00502089 | |||||||||
| WBVar01601652 | |||||||||
| WBVar01878328 | |||||||||
| WBVar01142564 | |||||||||
| WBVar01878329 | |||||||||
| WBVar00502090 | |||||||||
| WBVar01601653 | |||||||||
| WBVar01142565 | |||||||||
| WBVar01878330 | |||||||||
| WBVar01142566 | |||||||||
| WBVar00502091 | |||||||||
| WBVar01878331 | |||||||||
| WBVar00502092 | |||||||||
| WBVar01142567 | |||||||||
| WBVar00502093 | |||||||||
| WBVar01142568 | |||||||||
| WBVar01878332 | |||||||||
| WBVar00502094 | |||||||||
| WBVar01142569 | |||||||||
| WBVar01878333 | |||||||||
| WBVar00502095 | |||||||||
| WBVar01142570 | |||||||||
| WBVar01142571 | |||||||||
| WBVar00502096 | |||||||||
| WBVar02063567 | |||||||||
| WBVar01142572 | |||||||||
| WBVar00502097 | |||||||||
| WBVar02063568 | |||||||||
| WBVar00502098 | |||||||||
| WBVar01142573 | |||||||||
| WBVar01142574 | |||||||||
| WBVar00502099 | |||||||||
| WBVar02063569 | |||||||||
| WBVar01142575 | |||||||||
| WBVar02063570 | |||||||||
| WBVar02063571 | |||||||||
| WBVar01142576 | |||||||||
| WBVar01142577 | |||||||||
| WBVar02063572 | |||||||||
| WBVar01142578 | |||||||||
| WBVar01142579 | |||||||||
| WBVar01142580 | |||||||||
| WBVar01142581 | |||||||||
| WBVar01142582 | |||||||||
| WBVar01142583 | |||||||||
| WBVar01142584 | |||||||||
| WBVar01142585 | |||||||||
| WBVar01142586 | |||||||||
| WBVar01909399 | |||||||||
| WBVar01142587 | |||||||||
| WBVar01142588 | |||||||||
| WBVar01142589 | |||||||||
| WBVar01142590 | |||||||||
| WBVar01142591 | |||||||||
| WBVar01142592 | |||||||||
| WBVar01486861 | |||||||||
| WBVar01142593 | |||||||||
| WBVar01142594 | |||||||||
| WBVar01486862 | |||||||||
| WBVar01486863 | |||||||||
| WBVar01142595 | |||||||||
| WBVar01142596 | |||||||||
| WBVar01486864 | |||||||||
| WBVar01142597 | |||||||||
| WBVar01142598 | |||||||||
| WBVar01142599 | |||||||||
| WBVar01142600 | |||||||||
| WBVar01710759 | |||||||||
| WBVar01142601 | |||||||||
| WBVar01710760 | |||||||||
| WBVar01142602 | |||||||||
| WBVar01142603 | |||||||||
| WBVar01710761 | |||||||||
| WBVar01142604 | |||||||||
| WBVar01710762 | |||||||||
| WBVar01710763 | |||||||||
| WBVar01142605 | |||||||||
| WBVar01142606 | |||||||||
| WBVar01710764 | |||||||||
| WBVar01142607 | |||||||||
| WBVar01710765 | |||||||||
| WBVar01499756 | |||||||||
| WBVar01499757 | |||||||||
| WBVar01710766 | |||||||||
| WBVar01142608 | |||||||||
| WBVar01142609 | |||||||||
| WBVar01710767 | |||||||||
| WBVar01710768 | |||||||||
| WBVar01945154 | |||||||||
| WBVar01142610 | |||||||||
| WBVar01710769 | |||||||||
| WBVar01142611 | |||||||||
| WBVar01142612 | |||||||||
| WBVar01710770 | |||||||||
| WBVar01142613 | |||||||||
| WBVar01710771 | |||||||||
| WBVar01142614 | |||||||||
| WBVar01710772 | |||||||||
| WBVar01417342 | |||||||||
| WBVar01142615 | |||||||||
| WBVar01897617 | |||||||||
| WBVar01710773 | |||||||||
| WBVar01710774 | |||||||||
| WBVar01142616 | |||||||||
| WBVar01710775 | |||||||||
| WBVar00144589 | |||||||||
| WBVar01834970 | |||||||||
| WBVar00265436 | |||||||||
| WBVar01468651 | |||||||||
| WBVar01468652 | |||||||||
| WBVar00255511 | |||||||||
| WBVar00256620 | |||||||||
| WBVar00090226 | |||||||||
| WBVar00307208 | |||||||||
| WBVar01980559 | |||||||||
| WBVar01980560 | |||||||||
| WBVar01980561 | |||||||||
| WBVar01980562 | |||||||||
| WBVar02050515 | |||||||||
| WBVar02050516 | |||||||||
| WBVar00144975 | |||||||||
| WBVar02144425 | |||||||||
| WBVar00143184 | |||||||||
| WBVar02015524 | |||||||||
| WBVar00078182 | |||||||||
| WBVar02015525 | |||||||||
| WBVar00078183 | |||||||||
| WBVar02015526 | |||||||||
| WBVar00078184 | |||||||||
| WBVar00078185 | |||||||||
| WBVar00078186 | |||||||||
| WBVar00078187 | |||||||||
| WBVar00143211 | |||||||||
| WBVar00078188 | |||||||||
| WBVar00078189 | |||||||||
| WBVar00078190 | |||||||||
| WBVar01498929 | |||||||||
| WBVar00078191 | |||||||||
| WBVar00078192 | |||||||||
| WBVar02070379 | |||||||||
| WBVar01500236 | |||||||||
| WBVar01500237 | |||||||||
| WBVar02116351 | |||||||||
| WBVar01142537 | |||||||||
| WBVar00243572 | |||||||||
| WBVar01142538 | |||||||||
| WBVar01142539 | |||||||||
| WBVar01142540 | |||||||||
| WBVar01142541 | |||||||||
| WBVar01142542 | |||||||||
| WBVar01142543 | |||||||||
| WBVar01142544 | |||||||||
| WBVar01142545 | |||||||||
| WBVar01142546 | |||||||||
| WBVar01142547 | |||||||||
| WBVar01878311 | |||||||||
| WBVar01142548 | |||||||||
| WBVar01878312 | |||||||||
| WBVar01878313 | |||||||||
| WBVar01142549 | |||||||||
| WBVar01500067 | |||||||||
| WBVar01878314 | |||||||||
| WBVar01142550 | |||||||||
| Legacy_information | e678 : about 50% longer than wildtype at all stages. ES3. Male bursa slightly elongated ME3 (ME0 at 25x?). NA5 (e405 e434 etc. : similar phenotype to e678). | ||||||||
| [C.elegansII] e678 : about 50% longer than wildtype at all stages; some embryonic lethality; ES3. Male bursa slightly elongated, ME3 (ME0 at25C?). OA4: e405, e434, n1346, n1630 etc. (allsimilar to e678). [Brenner 1974] | |||||||||
| Strain (224) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Concise_description | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans; during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length; genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling; in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells; LON-2 localizes to the cell surface. | Paper_evidence | WBPaper00029002 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 24 Jan 2007 00:00:00 | ||||||||
| Automated_description | Enables growth factor binding activity. Involved in several processes, including negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway; regulation of cell migration; and regulation of mesodermal cell fate specification. Located in cell surface. Expressed in hypodermis and intestine. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39E6.1 | |||||||
| Corresponding_CDS_history | C39E6.1:wp107 | ||||||||
| Corresponding_transcript | C39E6.1.1 | ||||||||
| Other_sequence | CRC07010_1 | ||||||||
| CR09868 | |||||||||
| CGC00490_1 | |||||||||
| CBC13859_1 | |||||||||
| CJC03031_1 | |||||||||
| CRC04307_1 | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr4651 | ||||||||
| Expr4652 | |||||||||
| Expr12191 | |||||||||
| Expr1011265 | |||||||||
| Expr1031435 | |||||||||
| Expr1146202 | |||||||||
| Expr2013244 | |||||||||
| Expr2031475 | |||||||||
| Drives_construct (5) | |||||||||
| Construct_product | WBCnstr00012151 | ||||||||
| WBCnstr00021471 | |||||||||
| WBCnstr00021474 | |||||||||
| WBCnstr00021479 | |||||||||
| WBCnstr00036259 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | X | Position | -6.74013 | Error | 0.007834 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr | mnDp30 | |||||||
| yDp4 | |||||||||
| Positive_clone | C39E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| F43C9 | |||||||||
| Negative | Outside_rearr | mcDf2 | |||||||
| Mapping_data | 2_point (57) | ||||||||
| Multi_point (150) | |||||||||
| Pos_neg_data (31) | |||||||||
| Landmark_gene | |||||||||
| Reference (155) | |||||||||
| Remark | sequence wsa incorrectly given as F43C9.3 | ||||||||
| Method | Gene |
