WormBase Tree Display for Gene: WBGene00003056
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WBGene00003056 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lon | ||||||
Reference_allele | WBVar00143398 | ||||||
Allele | WBVar00143398 | Inferred_automatically | From strain object: AF1 | ||||
From strain object: BW1118 | |||||||
From strain object: CB2198 | |||||||
From strain object: CB2199 | |||||||
From strain object: CB2217 | |||||||
From strain object: CB2238 | |||||||
From strain object: CB2620 | |||||||
From strain object: CB3253 | |||||||
From strain object: CB3270 | |||||||
From strain object: CB3271 | |||||||
From strain object: CB3273 | |||||||
From strain object: CB3274 | |||||||
From strain object: CB3275 | |||||||
From strain object: CB3276 | |||||||
From strain object: CB3475 | |||||||
From strain object: CB3533 | |||||||
From strain object: CB5042 | |||||||
From strain object: CB5310 | |||||||
From strain object: CB678 | |||||||
From strain object: CB7538 | |||||||
From strain object: CGC28 | |||||||
From strain object: CGC35 | |||||||
From strain object: CGC40 | |||||||
From strain object: CGC41 | |||||||
From strain object: CGC46 | |||||||
From strain object: CGC50 | |||||||
From strain object: CGC79 | |||||||
From strain object: CGC97 | |||||||
From strain object: CS624 | |||||||
From strain object: DA1077 | |||||||
From strain object: DA1096 | |||||||
From strain object: DA438 | |||||||
From strain object: DA658 | |||||||
From strain object: DA742 | |||||||
From strain object: DR112 | |||||||
From strain object: DR113 | |||||||
From strain object: DR205 | |||||||
From strain object: DR733 | |||||||
From strain object: DR921 | |||||||
From strain object: EE31 | |||||||
From strain object: EG1020 | |||||||
From strain object: EU307 | |||||||
From strain object: EU308 | |||||||
From strain object: EU361 | |||||||
From strain object: FX11552 | |||||||
From strain object: GE1076 | |||||||
From strain object: GE1386 | |||||||
From strain object: GE1549 | |||||||
From strain object: GR1028 | |||||||
From strain object: GR1029 | |||||||
From strain object: HL2000 | |||||||
From strain object: HR1184 | |||||||
From strain object: HR890 | |||||||
From strain object: JK323 | |||||||
From strain object: JM69 | |||||||
From strain object: KM48 | |||||||
From strain object: KR1115 | |||||||
From strain object: KR1142 | |||||||
From strain object: KR1537 | |||||||
From strain object: KR1588 | |||||||
From strain object: KR1594 | |||||||
From strain object: KR1598 | |||||||
From strain object: KR1692 | |||||||
From strain object: KR1694 | |||||||
From strain object: KR3910 | |||||||
From strain object: KR926 | |||||||
From strain object: LW2286 | |||||||
From strain object: LX677 | |||||||
From strain object: ML855 | |||||||
From strain object: MT1401 | |||||||
From strain object: MT1442 | |||||||
From strain object: MT1460 | |||||||
From strain object: MT1565 | |||||||
From strain object: MT1671 | |||||||
From strain object: MT1677 | |||||||
From strain object: MT1679 | |||||||
From strain object: MT1790 | |||||||
From strain object: MT2867 | |||||||
From strain object: MT3324 | |||||||
From strain object: MT3460 | |||||||
From strain object: MT455 | |||||||
From strain object: MT458 | |||||||
From strain object: MT464 | |||||||
From strain object: MT5439 | |||||||
From strain object: NG2267 | |||||||
From strain object: NH2693 | |||||||
From strain object: OH160 | |||||||
From strain object: PS1032 | |||||||
From strain object: QP122 | |||||||
From strain object: RE249 | |||||||
From strain object: RG3078 | |||||||
From strain object: RG3151 | |||||||
From strain object: RG3202 | |||||||
From strain object: SD1135 | |||||||
From strain object: SP413 | |||||||
From strain object: SP875 | |||||||
From strain object: SV411 | |||||||
From strain object: TP69 | |||||||
From strain object: TP91 | |||||||
From strain object: TU900 | |||||||
From strain object: TY1910 | |||||||
From strain object: TY1911 | |||||||
From strain object: TY1912 | |||||||
From strain object: TY1913 | |||||||
From strain object: TY1914 | |||||||
From strain object: TY1915 | |||||||
From strain object: TY1916 | |||||||
From strain object: TY1917 | |||||||
From strain object: TY404 | |||||||
From strain object: TY562 | |||||||
From strain object: TY567 | |||||||
From strain object: TY578 | |||||||
From strain object: TY714 | |||||||
From strain object: TY824 | |||||||
From strain object: VC1007 | |||||||
From strain object: VC1018 | |||||||
From strain object: VC1048 | |||||||
From strain object: VC1088 | |||||||
From strain object: VC1108 | |||||||
From strain object: VC1110 | |||||||
From strain object: VC1118 | |||||||
From strain object: VC1128 | |||||||
From strain object: VC1129 | |||||||
From strain object: VC1144 | |||||||
From strain object: VC115 | |||||||
From strain object: VC1155 | |||||||
From strain object: VC1176 | |||||||
From strain object: VC1246 | |||||||
From strain object: VC1376 | |||||||
From strain object: VC1434 | |||||||
From strain object: VC1508 | |||||||
From strain object: VC1513 | |||||||
From strain object: VC1595 | |||||||
From strain object: VC1599 | |||||||
From strain object: VC1619 | |||||||
From strain object: VC1680 | |||||||
From strain object: VC1700 | |||||||
From strain object: VC1703 | |||||||
From strain object: VC1745 | |||||||
From strain object: VC1782 | |||||||
From strain object: VC1829 | |||||||
From strain object: VC186 | |||||||
From strain object: VC1894 | |||||||
From strain object: VC2003 | |||||||
From strain object: VC2004 | |||||||
From strain object: VC2228 | |||||||
From strain object: VC2289 | |||||||
From strain object: VC250 | |||||||
From strain object: VC253 | |||||||
From strain object: VC2547 | |||||||
From strain object: VC2605 | |||||||
From strain object: VC2616 | |||||||
From strain object: VC2617 | |||||||
From strain object: VC2629 | |||||||
From strain object: VC264 | |||||||
From strain object: VC2640 | |||||||
From strain object: VC2647 | |||||||
From strain object: VC2659 | |||||||
From strain object: VC2708 | |||||||
From strain object: VC2739 | |||||||
From strain object: VC2784 | |||||||
From strain object: VC2835 | |||||||
From strain object: VC2836 | |||||||
From strain object: VC286 | |||||||
From strain object: VC2862 | |||||||
From strain object: VC298 | |||||||
From strain object: VC305 | |||||||
From strain object: VC3060 | |||||||
From strain object: VC3111 | |||||||
From strain object: VC3118 | |||||||
From strain object: VC3162 | |||||||
From strain object: VC3167 | |||||||
From strain object: VC3226 | |||||||
From strain object: VC3272 | |||||||
From strain object: VC339 | |||||||
From strain object: VC3454 | |||||||
From strain object: VC37 | |||||||
From strain object: VC38 | |||||||
From strain object: VC435 | |||||||
From strain object: VC466 | |||||||
From strain object: VC469 | |||||||
From strain object: VC477 | |||||||
From strain object: VC478 | |||||||
From strain object: VC479 | |||||||
From strain object: VC480 | |||||||
From strain object: VC484 | |||||||
From strain object: VC512 | |||||||
From strain object: VC538 | |||||||
From strain object: VC557 | |||||||
From strain object: VC560 | |||||||
From strain object: VC579 | |||||||
From strain object: VC639 | |||||||
From strain object: VC685 | |||||||
From strain object: VC721 | |||||||
From strain object: VC741 | |||||||
From strain object: VC756 | |||||||
From strain object: VC769 | |||||||
From strain object: VC786 | |||||||
From strain object: VC795 | |||||||
From strain object: VC796 | |||||||
From strain object: VC810 | |||||||
From strain object: VC827 | |||||||
From strain object: VC843 | |||||||
From strain object: VC844 | |||||||
From strain object: VC845 | |||||||
From strain object: VC851 | |||||||
From strain object: VC856 | |||||||
From strain object: VC857 | |||||||
From strain object: VC858 | |||||||
From strain object: VC921 | |||||||
From strain object: VC963 | |||||||
From strain object: VC970 | |||||||
From strain object: VT191 | |||||||
From strain object: VT192 | |||||||
From strain object: VT284 | |||||||
From strain object: VT333 | |||||||
From strain object: WM101 | |||||||
From strain object: XA3102 | |||||||
WBVar00090138 | Inferred_automatically | From strain object: MT3124 | |||||
WBVar00143293 | |||||||
WBVar00143633 | |||||||
WBVar00145396 | |||||||
WBVar00143351 | |||||||
WBVar00143391 | |||||||
WBVar01878315 | |||||||
WBVar01142551 | |||||||
WBVar01142552 | |||||||
WBVar01526492 | |||||||
WBVar01878316 | |||||||
WBVar01142553 | |||||||
WBVar00502078 | |||||||
WBVar01878317 | |||||||
WBVar01142554 | |||||||
WBVar00502079 | |||||||
WBVar01878318 | |||||||
WBVar00502080 | |||||||
WBVar01878319 | |||||||
WBVar01142555 | |||||||
WBVar00502081 | |||||||
WBVar01878320 | |||||||
WBVar01142556 | |||||||
WBVar01142557 | |||||||
WBVar00502082 | |||||||
WBVar01878321 | |||||||
WBVar00502083 | |||||||
WBVar01878322 | |||||||
WBVar01142558 | |||||||
WBVar01830262 | |||||||
WBVar01878323 | |||||||
WBVar01830263 | |||||||
WBVar00502084 | |||||||
WBVar01142559 | |||||||
WBVar01142560 | |||||||
WBVar00502085 | |||||||
WBVar01830264 | |||||||
WBVar01878324 | |||||||
WBVar01142561 | |||||||
WBVar01830265 | |||||||
WBVar01878325 | |||||||
WBVar02151986 | |||||||
WBVar00502086 | |||||||
WBVar01142562 | |||||||
WBVar01878326 | |||||||
WBVar00502087 | |||||||
WBVar00502088 | |||||||
WBVar01142563 | |||||||
WBVar01878327 | |||||||
WBVar00502089 | |||||||
WBVar01601652 | |||||||
WBVar01878328 | |||||||
WBVar01142564 | |||||||
WBVar01878329 | |||||||
WBVar00502090 | |||||||
WBVar01601653 | |||||||
WBVar01142565 | |||||||
WBVar01878330 | |||||||
WBVar01142566 | |||||||
WBVar00502091 | |||||||
WBVar01878331 | |||||||
WBVar00502092 | |||||||
WBVar01142567 | |||||||
WBVar00502093 | |||||||
WBVar01142568 | |||||||
WBVar01878332 | |||||||
WBVar00502094 | |||||||
WBVar01142569 | |||||||
WBVar01878333 | |||||||
WBVar00502095 | |||||||
WBVar01142570 | |||||||
WBVar01142571 | |||||||
WBVar00502096 | |||||||
WBVar02063567 | |||||||
WBVar01142572 | |||||||
WBVar00502097 | |||||||
WBVar02063568 | |||||||
WBVar00502098 | |||||||
WBVar01142573 | |||||||
WBVar01142574 | |||||||
WBVar00502099 | |||||||
WBVar02063569 | |||||||
WBVar01142575 | |||||||
WBVar02063570 | |||||||
WBVar02063571 | |||||||
WBVar01142576 | |||||||
WBVar01142577 | |||||||
WBVar02063572 | |||||||
WBVar01142578 | |||||||
WBVar01142579 | |||||||
WBVar01142580 | |||||||
WBVar01142581 | |||||||
WBVar01142582 | |||||||
WBVar01142583 | |||||||
WBVar01142584 | |||||||
WBVar01142585 | |||||||
WBVar01142586 | |||||||
WBVar01909399 | |||||||
WBVar01142587 | |||||||
WBVar01142588 | |||||||
WBVar01142589 | |||||||
WBVar01142590 | |||||||
WBVar01142591 | |||||||
WBVar01142592 | |||||||
WBVar01486861 | |||||||
WBVar01142593 | |||||||
WBVar01142594 | |||||||
WBVar01486862 | |||||||
WBVar01486863 | |||||||
WBVar01142595 | |||||||
WBVar01142596 | |||||||
WBVar01486864 | |||||||
WBVar01142597 | |||||||
WBVar01142598 | |||||||
WBVar01142599 | |||||||
WBVar01142600 | |||||||
WBVar01710759 | |||||||
WBVar01142601 | |||||||
WBVar01710760 | |||||||
WBVar01142602 | |||||||
WBVar01142603 | |||||||
WBVar01710761 | |||||||
WBVar01142604 | |||||||
WBVar01710762 | |||||||
WBVar01710763 | |||||||
WBVar01142605 | |||||||
WBVar01142606 | |||||||
WBVar01710764 | |||||||
WBVar01142607 | |||||||
WBVar01710765 | |||||||
WBVar01499756 | |||||||
WBVar01499757 | |||||||
WBVar01710766 | |||||||
WBVar01142608 | |||||||
WBVar01142609 | |||||||
WBVar01710767 | |||||||
WBVar01710768 | |||||||
WBVar01945154 | |||||||
WBVar01142610 | |||||||
WBVar01710769 | |||||||
WBVar01142611 | |||||||
WBVar01142612 | |||||||
WBVar01710770 | |||||||
WBVar01142613 | |||||||
WBVar01710771 | |||||||
WBVar01142614 | |||||||
WBVar01710772 | |||||||
WBVar01417342 | |||||||
WBVar01142615 | |||||||
WBVar01897617 | |||||||
WBVar01710773 | |||||||
WBVar01710774 | |||||||
WBVar01142616 | |||||||
WBVar01710775 | |||||||
WBVar00144589 | |||||||
WBVar01834970 | |||||||
WBVar00265436 | |||||||
WBVar01468651 | |||||||
WBVar01468652 | |||||||
WBVar00255511 | |||||||
WBVar00256620 | |||||||
WBVar00090226 | |||||||
WBVar00307208 | |||||||
WBVar01980559 | |||||||
WBVar01980560 | |||||||
WBVar01980561 | |||||||
WBVar01980562 | |||||||
WBVar02050515 | |||||||
WBVar02050516 | |||||||
WBVar00144975 | |||||||
WBVar02144425 | |||||||
WBVar00143184 | |||||||
WBVar02015524 | |||||||
WBVar00078182 | |||||||
WBVar02015525 | |||||||
WBVar00078183 | |||||||
WBVar02015526 | |||||||
WBVar00078184 | |||||||
WBVar00078185 | |||||||
WBVar00078186 | |||||||
WBVar00078187 | |||||||
WBVar00143211 | |||||||
WBVar00078188 | |||||||
WBVar00078189 | |||||||
WBVar00078190 | |||||||
WBVar01498929 | |||||||
WBVar00078191 | |||||||
WBVar00078192 | |||||||
WBVar02070379 | |||||||
WBVar01500236 | |||||||
WBVar01500237 | |||||||
WBVar02116351 | |||||||
WBVar01142537 | |||||||
WBVar00243572 | |||||||
WBVar01142538 | |||||||
WBVar01142539 | |||||||
WBVar01142540 | |||||||
WBVar01142541 | |||||||
WBVar01142542 | |||||||
WBVar01142543 | |||||||
WBVar01142544 | |||||||
WBVar01142545 | |||||||
WBVar01142546 | |||||||
WBVar01142547 | |||||||
WBVar01878311 | |||||||
WBVar01142548 | |||||||
WBVar01878312 | |||||||
WBVar01878313 | |||||||
WBVar01142549 | |||||||
WBVar01500067 | |||||||
WBVar01878314 | |||||||
WBVar01142550 | |||||||
Legacy_information | e678 : about 50% longer than wildtype at all stages. ES3. Male bursa slightly elongated ME3 (ME0 at 25x?). NA5 (e405 e434 etc. : similar phenotype to e678). | ||||||
[C.elegansII] e678 : about 50% longer than wildtype at all stages; some embryonic lethality; ES3. Male bursa slightly elongated, ME3 (ME0 at25C?). OA4: e405, e434, n1346, n1630 etc. (allsimilar to e678). [Brenner 1974] | |||||||
Strain (224) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (19) | |||||||
Ortholog (25) | |||||||
Structured_description | Concise_description | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans; during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length; genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling; in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells; LON-2 localizes to the cell surface. | Paper_evidence | WBPaper00029002 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 24 Jan 2007 00:00:00 | ||||||
Automated_description | Enables growth factor binding activity. Involved in several processes, including negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway; regulation of cell migration; and regulation of mesodermal cell fate specification. Located in cell surface. Expressed in hypodermis and intestine. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C39E6.1 | |||||
Corresponding_CDS_history | C39E6.1:wp107 | ||||||
Corresponding_transcript | C39E6.1.1 | ||||||
Other_sequence | CRC07010_1 | ||||||
CR09868 | |||||||
CGC00490_1 | |||||||
CBC13859_1 | |||||||
CJC03031_1 | |||||||
CRC04307_1 | |||||||
Associated_feature (15) | |||||||
Experimental_info | RNAi_result (23) | ||||||
Expr_pattern | Expr4651 | ||||||
Expr4652 | |||||||
Expr12191 | |||||||
Expr1011265 | |||||||
Expr1031435 | |||||||
Expr1146202 | |||||||
Expr2013244 | |||||||
Expr2031475 | |||||||
Drives_construct | WBCnstr00012150 | ||||||
WBCnstr00012151 | |||||||
WBCnstr00021097 | |||||||
WBCnstr00021479 | |||||||
WBCnstr00036259 | |||||||
Construct_product | WBCnstr00012151 | ||||||
WBCnstr00021471 | |||||||
WBCnstr00021474 | |||||||
WBCnstr00021479 | |||||||
WBCnstr00036259 | |||||||
Microarray_results (21) | |||||||
Expression_cluster (142) | |||||||
Interaction (24) | |||||||
Map_info | Map | X | Position | -6.74013 | Error | 0.007834 | |
Well_ordered | |||||||
Positive | Inside_rearr | mnDp30 | |||||
yDp4 | |||||||
Positive_clone | C39E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
F43C9 | |||||||
Negative | Outside_rearr | mcDf2 | |||||
Mapping_data | 2_point (57) | ||||||
Multi_point (150) | |||||||
Pos_neg_data (31) | |||||||
Landmark_gene | |||||||
Reference (155) | |||||||
Remark | sequence wsa incorrectly given as F43C9.3 | ||||||
Method | Gene |