WormBase Tree Display for Gene: WBGene00003100

WBGene00003100 SMap: S_parent: Sequence: Y53C12B
  Identity: Version: 1
    Name: CGC_name: mab-3 Person_evidence: WBPerson261
      Sequence_name: Y53C12B.5
      Molecular_name: Y53C12B.5a
        Y53C12B.5a.1
        CE14902
        Y53C12B.5b
        CE51560
        Y53C12B.5b.1
        Y53C12B.5b.2
      Other_name: CELE_Y53C12B.5 Accession_evidence: NDB BX284602
      Public_name: mab-3
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: Y53C12B.5a
      Y53C12B.5b
    Corresponding_CDS_history: Y53C12B.5b:wp253
    Corresponding_transcript: Y53C12B.5a.1
      Y53C12B.5b.1
      Y53C12B.5b.2
    Other_sequence: Dviv_isotig08806
      Dviv_isotig08805
      Oden_isotig19447
    Associated_feature (16)
    Gene_product_binds: WBsf977964
    Transcription_factor: WBTranscriptionFactor000032
  Experimental_info: RNAi_result: WBRNAi00020914 Inferred_automatically: RNAi_primary
      WBRNAi00057258 Inferred_automatically: RNAi_primary
      WBRNAi00027798 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr950
      Expr3376
      Expr14651
      Expr1023078
      Expr1160695
      Expr2013327
      Expr2031559
    Drives_construct: WBCnstr00000514
      WBCnstr00013819
      WBCnstr00036229
    Construct_product: WBCnstr00007577
      WBCnstr00013819
      WBCnstr00036229
    Microarray_results (28)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00042165:let-7_downregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Spermatogenic
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00046805:csr-1(RNAi)_upregulated_Set2
      WBPaper00048611:MnCl2_upregulated
      WBPaper00048988:daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00050080:rbr-2(tm3141)_downregulated
      WBPaper00050231:male_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050717:let-7(n2853)_lin-41(xe11)_downregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055482:Tunicamycin_downregulated
      WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200)_downregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00056617:adr-2_upregulated_L4_transcript
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00059191:hsp-16.2p-LIN-29_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060871:M.humicola-extract_1h_regulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00061106:endu-2(tm4977)_upregulated
      WBPaper00061340:BWM_far_posterior
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:C36C5.12-F57G8.7
      WBPaper00061753:csr-1(tor159)_downregulated_20C
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062345:bortezomib_4h_downregulated_N2
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064130:Beta-Amyloid_8h_upregulated_mRNA
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065258:anchor-cell_depleted
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:7_4
      WBPaper00065841:30_0
      WBPaper00065841:30_2
      WBPaper00065841:30_5
      WBPaper00065841:34_0
      WBPaper00065841:64_0
      WBPaper00065841:141_0
      WBPaper00065841:143_0
      WBPaper00065841:145_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_18
      WBPaper00026629:L4_male_enriched
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_G
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
    Interaction (131)
  Map_info: Map: II Position: 1.70477 Error: 0.004625
    Well_ordered
    Positive: Inside_rearr: eDf21
      Positive_clone: Y53C12B Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 337
      Multi_point: 206
        1059
        4543
      Pos_neg_data (16)
  Reference (118)
  Remark: sequence link from jah 980604
    (a) removed from sequence. only .5 in sequence list. [sdm 05/00]
  Method: Gene