WormBase Tree Display for Gene: WBGene00003107
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WBGene00003107 | SMap | S_parent | Sequence | R166 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mab | ||||||
Reference_allele | WBVar00143858 | ||||||
Allele (119) | |||||||
Legacy_information | e1248 : adult male has slightly swollen bursa reduced fan thin rays; some adult males have supernumerary molt. ES2 ME0. Hermaphrodite has slightly protruding vulva ES2. NA1. | ||||||
See also e1235, e1248 | |||||||
[C.elegansII] e1248 : adult male has slightly swollen bursa, reduced fan, thin rays; some adult males have supernumerary molt, second adult cuticle. e1248/Df more severe. ES2 ME0. Hermaphrodite has slightly protruding vulva. ES2. NA1. [Hodgkin 1983a; Link et al. 1988; CB; CL] | |||||||
Strain | WBStrain00004492 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Ortholog (38) | |||||||
Structured_description | Automated_description | Enables DNA-binding transcription factor binding activity and transcription coregulator activity. Involved in several processes, including exit from mitosis; regulation of development, heterochronic; and regulation of vulval development. Located in nucleus. Expressed in several structures, including gonad; hypodermis; pharynx; somatic nervous system; and vulval cell. Is an ortholog of human NAB1 (NGFI-A binding protein 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R166.1a | |||||
Corresponding_transcript | R166.1b | ||||||
R166.1a.1 | |||||||
R166.1a.2 | |||||||
Other_sequence | FC820380.1 | ||||||
SRC05945_1 | |||||||
FC819997.1 | |||||||
JI167243.1 | |||||||
JI469571.1 | |||||||
ACC10272_1 | |||||||
SR03237 | |||||||
EX550854.1 | |||||||
Associated_feature | WBsf989371 | ||||||
WBsf989372 | |||||||
WBsf989373 | |||||||
WBsf989374 | |||||||
WBsf989375 | |||||||
WBsf1013034 | |||||||
WBsf1013035 | |||||||
WBsf1013036 | |||||||
WBsf1013037 | |||||||
WBsf1013038 | |||||||
Experimental_info | RNAi_result | WBRNAi00017883 | Inferred_automatically | RNAi_primary | |||
WBRNAi00034946 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051997 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9660 | ||||||
Expr9661 | |||||||
Expr14647 | |||||||
Expr1014146 | |||||||
Expr1031469 | |||||||
Expr1155639 | |||||||
Expr2013322 | |||||||
Expr2031554 | |||||||
Drives_construct | WBCnstr00009532 | ||||||
WBCnstr00014208 | |||||||
WBCnstr00016068 | |||||||
WBCnstr00036226 | |||||||
Construct_product | WBCnstr00009532 | ||||||
WBCnstr00014208 | |||||||
WBCnstr00016068 | |||||||
WBCnstr00036226 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (118) | |||||||
Interaction (18) | |||||||
Map_info | Map | II | Position | 3.07397 | Error | 0.020491 | |
Positive | Positive_clone | R166 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 1392 | |||||
1393 | |||||||
1394 | |||||||
1395 | |||||||
Pos_neg_data | 3356 | ||||||
3671 | |||||||
3674 | |||||||
3788 | |||||||
3789 | |||||||
3790 | |||||||
Reference (19) | |||||||
Method | Gene |