Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00003173

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00003173SMapS_parentSequenceC50H2
IdentityVersion1
NameCGC_namemec-9Person_evidenceWBPerson95
Sequence_nameC50H2.3
Molecular_nameC50H2.3a
C50H2.3a.1
CE05481
C50H2.3b
CE08916
C50H2.3b.1
Other_nameCELE_C50H2.3Accession_evidenceNDBBX284605
Public_namemec-9
DB_infoDatabaseWormQTLgeneWBGene00003173
WormFluxgeneWBGene00003173
NDBlocus_tagCELE_C50H2.3
PanthergeneCAEEL|WormBase=WBGene00003173|UniProtKB=Q18761
familyPTHR24039
NCBIgene179382
RefSeqproteinNM_001269224.3
NM_001269225.3
TREEFAMTREEFAM_IDTF316678
TrEMBLUniProtAccG3MVG9
Q18761
UniProt_GCRPUniProtAccQ18761
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmec
Allele (119)
Legacy_informationu27amber : touch insensitive lethargic. ES2 ME2. NA > 20 (e1494 u164amber etc.).
[C.elegansII] u27amb : touch insensitive lethargic. ES2 ME2. OA>30: e1494, e1852, u164amb etc. Cloned: 2 kb and 3 kb transcripts, transpliced to SL1 and SL2, encode protein with Kunitztype serine protease inhibitor domains, EGF-like repeats. mec-9:GFP expressed in touch cells and PVD (3kb promoter) or more extensively (2kb promoter). [Chalfie and Au 1989; Huang and Chalfie 1994; TU]
StrainWBStrain00032822
WBStrain00004348
WBStrain00006234
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (21)
Paralog (31)
Structured_description (2)
Molecular_infoCorresponding_CDSC50H2.3a
C50H2.3b
Corresponding_CDS_historyC50H2.3a:wp144
C50H2.3b:wp144
Corresponding_transcriptC50H2.3a.1
C50H2.3b.1
Other_sequence (14)
Associated_featureWBsf669266
WBsf669267
WBsf669268
WBsf1001008
WBsf1020239
WBsf234297
Experimental_infoRNAi_resultWBRNAi00042982Inferred_automaticallyRNAi_primary
WBRNAi00012263Inferred_automaticallyRNAi_primary
WBRNAi00067621Inferred_automaticallyRNAi_primary
WBRNAi00112683Inferred_automaticallyRNAi_primary
WBRNAi00089014Inferred_automaticallyRNAi_primary
Expr_patternExpr268
Expr1026433
Expr1146947
Expr2013503
Expr2031737
Drives_constructWBCnstr00004795
WBCnstr00036197
Construct_productWBCnstr00036197
Microarray_results (23)
Expression_cluster (161)
Interaction (29)
Map_infoMapVPosition2.2108Error0.000399
Well_ordered
PositiveInside_rearreDf1
Positive_cloneC50H2Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeNegative_cloneF15H4
Mapping_data2_point133
Multi_point284
3103
3104
4628
Pos_neg_data495
1747
1751
3124
3125
3126
3127
Reference (49)
MethodGene