WormBase Tree Display for Gene: WBGene00003174

WBGene00003174 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: CGC_name: mec-10 Person_evidence: WBPerson95
      Sequence_name: F16F9.5
      Molecular_name: F16F9.5
        F16F9.5.1
        CE09444
      Other_name: deg-2
        CELE_F16F9.5 Accession_evidence: NDB BX284606
      Public_name: mec-10
    DB_info: Database: AceView gene XJ86
        WormQTL gene WBGene00003174
        WormFlux gene WBGene00003174
        NDB locus_tag CELE_F16F9.5
        Panther gene CAEEL|WormBase=WBGene00003174|UniProtKB=P34886
          family PTHR11690
        NCBI gene 181101
        RefSeq protein NM_077037.7
        SwissProt UniProtAcc P34886
        UniProt_GCRP UniProtAcc P34886
        OMIM gene 600228
            600760
            600761
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:31 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Disease_info: Potential_model: DOID:0080526 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10600)
      DOID:0080527 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10599)
      DOID:0050477 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10599,HGNC:10600,HGNC:10602)
      DOID:4479 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10599,HGNC:10600,HGNC:10602)
      DOID:0080528 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10602)
      DOID:769 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10599)
  Molecular_info: Corresponding_CDS: F16F9.5
    Corresponding_transcript: F16F9.5.1
    Other_sequence (28)
    Associated_feature: WBsf654219
      WBsf654220
      WBsf670844
      WBsf670845
      WBsf670846
      WBsf982214
      WBsf237686
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr1523
      Expr9058
      Expr9059
      Expr1014394
      Expr1148774
      Expr2013488
      Expr2031722
    Drives_construct: WBCnstr00000194
      WBCnstr00004788
      WBCnstr00010321
      WBCnstr00020854
      WBCnstr00021730
      WBCnstr00036196
    Construct_product (16)
    Microarray_results (18)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040420:ALM_PLM_enriched
      WBPaper00040420:FLP_enriched
      WBPaper00044736:flat_dev_expression
      WBPaper00045934:wrn-1(gk99)_downregulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053295:lin-22(ot267)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay4
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060764:swsn-9(ok1354)_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061340:ALM_BDU
      WBPaper00061340:ALM_PLM
      WBPaper00061340:ALN
      WBPaper00061340:PLM
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061527:rgs-2_11061-pde-1
      WBPaper00061651:ALM_enriched
      WBPaper00061651:AVM_enriched
      WBPaper00061651:FLP_enriched
      WBPaper00061651:PLM_enriched
      WBPaper00061651:PVD_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062197:TRN_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
      WBPaper00065029:cadmium_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065623:67
      WBPaper00065623:75
      WBPaper00065841:20_0
      WBPaper00065841:20_1
      WBPaper00065841:20_2
      WBPaper00065841:54_0
      WBPaper00065841:70_0
      WBPaper00065841:70_1
      WBPaper00065841:94_0
      WBPaper00065945:epidermis-rpoa-2(-)_upregulated_transcript
      WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00032165:differentially_expressed_with_age_medoid_2
      WBPaper00033101:spr-5_regulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_I
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045294:50uM_TBBP_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction (105)
    WBProcess: WBbiopr:00000002
  Map_info: Map: X Position: 0.008152 Error: 0.018528
    Well_ordered
    Positive: Positive_clone: F16F9 Inferred_automatically: From sequence, transcript, pseudogene data
        TU#45
        TU#66
        YK1342
    Mapping_data: Multi_point: 423
        424
      Pos_neg_data: 2232
  Reference (147)
  Remark: deg-2 was merged into this gene following email from Erich Schwarz [krb 020719]
  Method: Gene