WormBase Tree Display for Gene: WBGene00003287
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| WBGene00003287 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | B0035 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-59 | Person_evidence | WBPerson18 | |||||
| Sequence_name | B0035.17 | ||||||||
| Molecular_name | B0035.17 | ||||||||
| B0035.17a | |||||||||
| B0035.17b | |||||||||
| Other_name | cel-mir-59 | Remark | miRBase V21 import | ||||||
| MirGeneDB 2.1 import | |||||||||
| CELE_B0035.17 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | mir-59 | ||||||||
| DB_info | Database | miRBase | acc | MI0000030 | |||||
| SignaLink | mirna | cel-mir-59 | |||||||
| MirGeneDB | cel | Cel-Mir-59 | |||||||
| NDB | locus_tag | CELE_B0035.17 | |||||||
| NCBI | gene | 259845 | |||||||
| RefSeq | protein | NR_000445.2 | |||||||
| RNAcentral | URSid | URS000020AFAB | |||||||
| URS00002D6677 | |||||||||
| URS0000456284 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01498996 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00090878 | |||||||||
| WBVar01498645 | |||||||||
| WBVar01499585 | |||||||||
| WBVar01499586 | |||||||||
| WBVar00942442 | |||||||||
| WBVar01500245 | |||||||||
| Strain | WBStrain00027497 | ||||||||
| WBStrain00040257 | |||||||||
| In_cluster | MIR-59 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-59 encodes a microRNA that belongs to a larger group of microRNAs that are probably involved in posttranscriptional regulation of genes. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00005825 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 09 Nov 2004 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including eat-2; prg-1; and alg-1 based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | B0035.17 | |||||||
| B0035.17a | |||||||||
| B0035.17b | |||||||||
| Other_sequence | AJ487583 | ||||||||
| Associated_feature | WBsf034326 | ||||||||
| WBsf979116 | |||||||||
| WBsf997803 | |||||||||
| WBsf1018192 | |||||||||
| Experimental_info | Expr_pattern | Expr2536 | |||||||
| Expr8402 | |||||||||
| Expr8462 | |||||||||
| Expr10885 | |||||||||
| Drives_construct | WBCnstr00005524 | ||||||||
| Expression_cluster (24) | |||||||||
| Interaction | WBInteraction000503774 | ||||||||
| Map_info | Map | IV | Position | 4.94716 | Error | 0.001352 | |||
| Positive | Positive_clone | B0035 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004927 | ||||||||
| WBPaper00005825 | |||||||||
| WBPaper00024441 | |||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032187 | |||||||||
| WBPaper00032329 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
