WormBase Tree Display for Gene: WBGene00003302
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| WBGene00003302 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T24D8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-74 | Person_evidence | WBPerson18 | |||||
| Sequence_name | T24D8.7 | ||||||||
| Molecular_name | T24D8.7 | ||||||||
| T24D8.7a | |||||||||
| T24D8.7b | |||||||||
| Other_name | cel-mir-74 | Remark | miRBase V21 import | ||||||
| Cel-Mir-73-P2 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_T24D8.7 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mir-74 | ||||||||
| DB_info | Database | miRBase | acc | MI0000045 | |||||
| SignaLink | mirna | cel-mir-74 | |||||||
| MirGeneDB | cel | Cel-Mir-73-P2 | |||||||
| NDB | locus_tag | CELE_T24D8.7 | |||||||
| NCBI | gene | 259999 | |||||||
| RefSeq | protein | NR_001272.2 | |||||||
| RNAcentral | URSid | URS00000387EB | |||||||
| URS0000357F5B | |||||||||
| URS0000597392 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01126261 | ||||||||
| WBVar01499636 | |||||||||
| WBVar00323156 | |||||||||
| Strain | WBStrain00027423 | ||||||||
| In_cluster | MIR-73 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-74 encodes a microRNA, a small non-protein coding RNA and has a potential ortholog in C. briggsae; based on miRNA sequence the mir-74 family consists of miR-74 and human miR-185; mir-74 is strongly expressed at all life stages in normal worms and in glp-4(bn2) mutant adults; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of mir-74 is not known. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00005825 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 24 Jan 2005 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including daf-12; eat-2; and prg-1 based on tiling array and RNA-seq studies. Is affected by Microcystin-LR and sanguinarine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | T24D8.7 | |||||||
| T24D8.7a | |||||||||
| T24D8.7b | |||||||||
| Experimental_info | Expr_pattern | Expr2496 | |||||||
| Expr10917 | |||||||||
| Expression_cluster (27) | |||||||||
| Interaction | WBInteraction000541200 | ||||||||
| Map_info | Positive | Inside_rearr | nDf47 | ||||||
| Positive_clone | T24D8 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Pos_neg_data | 10910 | |||||||
| Interpolated_map_position | X | -15.5958 | |||||||
| Reference | WBPaper00004927 | ||||||||
| WBPaper00005825 | |||||||||
| WBPaper00005879 | |||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032187 | |||||||||
| WBPaper00035664 | |||||||||
| Method | Gene |
