WormBase Tree Display for Gene: WBGene00003310
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| WBGene00003310 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T07D1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-82 | Person_evidence | WBPerson18 | |||||
| Sequence_name | T07D1.7 | ||||||||
| Molecular_name | T07D1.7 | ||||||||
| T07D1.7a | |||||||||
| T07D1.7b | |||||||||
| Other_name | cel-mir-82 | Remark | miRBase V21 import | ||||||
| CELE_T07D1.7 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mir-82 | ||||||||
| DB_info | Database | miRBase | acc | MI0000053 | |||||
| SignaLink | mirna | cel-mir-82 | |||||||
| NDB | locus_tag | CELE_T07D1.7 | |||||||
| NCBI | gene | 259790 | |||||||
| RefSeq | protein | NR_001271.2 | |||||||
| RNAcentral | URSid | URS00001394D2 | |||||||
| URS0000452F8B | |||||||||
| URS0000471DDD | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01126713 | ||||||||
| WBVar01126714 | |||||||||
| WBVar00496769 | |||||||||
| WBVar01499636 | |||||||||
| WBVar00323162 | |||||||||
| WBVar02151776 | |||||||||
| Strain | WBStrain00027445 | ||||||||
| WBStrain00007203 | |||||||||
| WBStrain00007204 | |||||||||
| WBStrain00007205 | |||||||||
| WBStrain00007206 | |||||||||
| WBStrain00051634 | |||||||||
| WBStrain00051633 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-82 encodes a microRNA, a small non-protein coding RNA and is conserved in C. briggsae; based on RNA sequence, mir-82 is included in the mir-80 family of microRNAs along with C. elegans miR-80 and miR-81 and human miR-143; mir-82 is strongly expressed at all developmental stages in normal worms and in glp-4(bn2) mutant worms; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-82 is unknown. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00004928 | |||||||||
| WBPaper00005825 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
| Automated_description | Expressed in amphid neurons; excretory gland cell; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | T07D1.7 | |||||||
| T07D1.7a | |||||||||
| T07D1.7b | |||||||||
| Gene_product_binds | WBsf977969 | ||||||||
| WBsf977970 | |||||||||
| WBsf977971 | |||||||||
| WBsf977972 | |||||||||
| Experimental_info | Expr_pattern | Expr2499 | |||||||
| Expr8403 | |||||||||
| Expr8477 | |||||||||
| Expr10930 | |||||||||
| Expr12850 | |||||||||
| Drives_construct | WBCnstr00005551 | ||||||||
| WBCnstr00022901 | |||||||||
| Expression_cluster (27) | |||||||||
| Interaction | WBInteraction000525170 | ||||||||
| WBInteraction000542495 | |||||||||
| WBInteraction000544769 | |||||||||
| WBInteraction000549480 | |||||||||
| WBInteraction000549484 | |||||||||
| WBInteraction000549485 | |||||||||
| WBInteraction000549486 | |||||||||
| WBInteraction000549487 | |||||||||
| Map_info | Positive | Inside_rearr | nDf54 | ||||||
| Positive_clone | T07D1 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Pos_neg_data | 10925 | |||||||
| Interpolated_map_position | X | -15.4801 | |||||||
| Reference (13) | |||||||||
| Method | Gene |
