WormBase Tree Display for Gene: WBGene00003314
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| WBGene00003314 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y56A3A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-86 | Person_evidence | WBPerson18 | |||||
| Sequence_name | Y56A3A.34 | ||||||||
| Molecular_name | Y56A3A.34 | ||||||||
| Y56A3A.34a | |||||||||
| Y56A3A.34b | |||||||||
| Other_name | cel-mir-86 | Remark | miRBase V21 import | ||||||
| MirGeneDB 2.1 import | |||||||||
| CELE_Y56A3A.34 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | mir-86 | ||||||||
| DB_info | Database | miRBase | acc | MI0000057 | |||||
| SignaLink | mirna | cel-mir-86 | |||||||
| MirGeneDB | cel | Cel-Mir-86 | |||||||
| NDB | locus_tag | CELE_Y56A3A.34 | |||||||
| NCBI | gene | 176630 | |||||||
| RefSeq | protein | NR_000190.2 | |||||||
| RNAcentral | URSid | URS00004C0694 | |||||||
| URS00004DC042 | |||||||||
| URS000059F36E | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01499701 | ||||||||
| WBVar00090881 | |||||||||
| WBVar01500138 | |||||||||
| WBVar01500139 | |||||||||
| WBVar01499774 | |||||||||
| WBVar00251657 | |||||||||
| WBVar00180784 | |||||||||
| WBVar00865752 | |||||||||
| WBVar00865753 | |||||||||
| Strain | WBStrain00027552 | ||||||||
| In_cluster | MIR-86 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-86 encodes a microRNA, a small non-protein coding RNA and is conserved in the nematode C. briggsae; mir-86 is strongly expressed at all developmental stages in normal worms and in glp-4(bn2) mutant worms; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-86 is unknown. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00005825 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
| Automated_description | Expressed in dorsal nerve cord; nerve ring; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | Y56A3A.34 | |||||||
| Y56A3A.34a | |||||||||
| Y56A3A.34b | |||||||||
| Other_sequence | AJ487609 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00037553 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr2500 | ||||||||
| Expr10942 | |||||||||
| Expr12851 | |||||||||
| Drives_construct | WBCnstr00022902 | ||||||||
| Expression_cluster (29) | |||||||||
| Map_info | Map | III | Position | 13.5261 | Error | 0.009897 | |||
| Positive | Positive_clone | Y56A3A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004927 | ||||||||
| WBPaper00005825 | |||||||||
| WBPaper00031335 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
