WormBase Tree Display for Gene: WBGene00003327
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| WBGene00003327 | Evidence | Paper_evidence | WBPaper00005879 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPaper00005825 | |||||||||
| SMap | S_parent | Sequence | C13B4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-234 | Person_evidence | WBPerson18 | |||||
| Sequence_name | C13B4.3 | ||||||||
| Molecular_name | C13B4.3 | ||||||||
| C13B4.3a | |||||||||
| C13B4.3b | |||||||||
| Other_name | cel-mir-234 | Remark | miRBase V21 import | ||||||
| Cel-Mir-137 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_C13B4.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | mir-234 | ||||||||
| DB_info | Database | miRBase | acc | MI0000309 | |||||
| SignaLink | mirna | cel-mir-234 | |||||||
| MirGeneDB | cel | Cel-Mir-137 | |||||||
| NDB | locus_tag | CELE_C13B4.3 | |||||||
| NCBI | gene | 3565181 | |||||||
| RefSeq | protein | NR_002356.2 | |||||||
| RNAcentral | URSid | URS000016C51F | |||||||
| URS0000360E7A | |||||||||
| URS000042A143 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar00090853 | |||||||||
| WBVar00015743 | |||||||||
| WBVar00789106 | |||||||||
| WBVar00789107 | |||||||||
| WBVar01500016 | |||||||||
| WBVar01498941 | |||||||||
| Strain | WBStrain00027469 | ||||||||
| In_cluster | MIR-137 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-234 encodes a microRNA, a small non-protein coding RNA and appears to be conserved in C. briggsae; based on RNA sequence identity miR-234 belongs to the miR-137 family of microRNAs; miR-234 is strongly expressed at the L1 stage of larval development and weakly at all other stages of development in normal worms and in glp-4(bn2) mutant worms; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-234 is unknown | Paper_evidence | WBPaper00005825 | |||||
| WBPaper00005879 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
| Automated_description | Expressed in neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C13B4.3 | |||||||
| C13B4.3a | |||||||||
| C13B4.3b | |||||||||
| Associated_feature | WBsf979100 | ||||||||
| WBsf990724 | |||||||||
| WBsf1013849 | |||||||||
| Experimental_info | Expr_pattern | Expr2540 | |||||||
| Expr8418 | |||||||||
| Expr10947 | |||||||||
| Expr13536 | |||||||||
| Expr15210 | |||||||||
| Drives_construct | WBCnstr00005536 | ||||||||
| WBCnstr00042069 | |||||||||
| Expression_cluster (21) | |||||||||
| Map_info | Map | II | Position | 23.0128 | Error | 0.003692 | |||
| Positive | Positive_clone | C13B4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005825 | ||||||||
| WBPaper00005879 | |||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032117 | |||||||||
| WBPaper00032329 | |||||||||
| WBPaper00035168 | |||||||||
| WBPaper00047962 | |||||||||
| WBPaper00056892 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
