WormBase Tree Display for Gene: WBGene00003341
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| WBGene00003341 | Evidence | Paper_evidence | WBPaper00005825 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C39E6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-247 | Person_evidence | WBPerson18 | |||||
| Sequence_name | C39E6.7 | ||||||||
| Molecular_name | C39E6.7 | ||||||||
| C39E6.7a | |||||||||
| C39E6.7b | |||||||||
| Other_name | cel-mir-247 | Remark | miRBase V21 import | ||||||
| Cel-Mir-279-o10 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_C39E6.7 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mir-247 | ||||||||
| DB_info | Database | miRBase | acc | MI0000323 | |||||
| SignaLink | mirna | cel-mir-247 | |||||||
| MirGeneDB | cel | Cel-Mir-279-o10 | |||||||
| NDB | locus_tag | CELE_C39E6.7 | |||||||
| NCBI | gene | 3565194 | |||||||
| RefSeq | protein | NR_002419.2 | |||||||
| RNAcentral | URSid | URS0000030B6C | |||||||
| URS000012E02D | |||||||||
| URS000034CF86 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar00090851 | ||||||||
| WBVar01499756 | |||||||||
| WBVar01499757 | |||||||||
| WBVar01142667 | |||||||||
| WBVar02015530 | |||||||||
| WBVar01498929 | |||||||||
| WBVar01500236 | |||||||||
| WBVar01500067 | |||||||||
| Strain | WBStrain00027546 | ||||||||
| WBStrain00027576 | |||||||||
| WBStrain00027581 | |||||||||
| WBStrain00027583 | |||||||||
| In_cluster | MIR-279 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-247 encodes a microRNA, a small non-protein coding RNA; mir-247 is weakly expressed at the L3 larval stage; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-247 is unknown. | Paper_evidence | WBPaper00005825 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 24 Feb 2005 00:00:00 | ||||||||
| Automated_description | Expressed in neurons and seam cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C39E6.7 | |||||||
| C39E6.7a | |||||||||
| C39E6.7b | |||||||||
| Associated_feature | WBsf979145 | ||||||||
| WBsf1005059 | |||||||||
| Gene_product_binds | WBsf047547 | ||||||||
| Experimental_info | Expr_pattern | Expr2542 | |||||||
| Expr8430 | |||||||||
| Expr8596 | |||||||||
| Expr10894 | |||||||||
| Drives_construct | WBCnstr00005545 | ||||||||
| WBCnstr00013389 | |||||||||
| Expression_cluster (22) | |||||||||
| Interaction | WBInteraction000542491 | ||||||||
| Map_info | Map | X | Position | -6.72614 | Error | 0.005779 | |||
| Positive | Positive_clone | C39E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005825 | ||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032329 | |||||||||
| WBPaper00032927 | |||||||||
| WBPaper00035664 | |||||||||
| WBPaper00052464 | |||||||||
| WBPaper00056592 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
