WormBase Tree Display for Gene: WBGene00003438
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| WBGene00003438 | SMap | S_parent | Sequence | F58A6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | msp-45 | Person_evidence | WBPerson680 | |||||
| Sequence_name | F58A6.8 | ||||||||
| Molecular_name | F58A6.8 | ||||||||
| F58A6.8.1 | |||||||||
| CE02806 | |||||||||
| Other_name | CELE_F58A6.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | msp-45 | ||||||||
| DB_info | Database | AceView | gene | 2F446 | |||||
| WormQTL | gene | WBGene00003438 | |||||||
| WormFlux | gene | WBGene00003438 | |||||||
| NDB | locus_tag | CELE_F58A6.8 | |||||||
| NCBI | gene | 173884 | |||||||
| RefSeq | protein | NM_062558.8 | |||||||
| SwissProt | UniProtAcc | P53017 | |||||||
| UniProt_GCRP | UniProtAcc | P53017 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | msp | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar02156534 | |||||||||
| WBVar00730351 | |||||||||
| WBVar00730352 | |||||||||
| WBVar00730353 | |||||||||
| WBVar00730354 | |||||||||
| Legacy_information | Cluster of four genes one pseudogene including msp-45. | ||||||||
| [C.elegansII] NMK. Encodes MSP (16kD); defines msp-45 cluster (five genes, one pseudogene). [Ward et al. (1988); BA] | |||||||||
| Strain | WBStrain00051307 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Paralog (49) | |||||||||
| Structured_description | Concise_description | msp-45 encodes a member of the major sperm protein family. | Paper_evidence | WBPaper00001023 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Expressed in gonad; oocyte; and sperm. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58A6.8 | |||||||
| Corresponding_transcript | F58A6.8.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature | WBsf223004 | ||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr3417 | ||||||||
| Expr1152682 | |||||||||
| Expr2013777 | |||||||||
| Expr2032016 | |||||||||
| Drives_construct | WBCnstr00036117 | ||||||||
| Construct_product | WBCnstr00036117 | ||||||||
| Antibody | WBAntibody00000037 | ||||||||
| WBAntibody00000038 | |||||||||
| WBAntibody00000854 | |||||||||
| WBAntibody00000855 | |||||||||
| WBAntibody00000856 | |||||||||
| WBAntibody00000857 | |||||||||
| WBAntibody00000858 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (238) | |||||||||
| Interaction (198) | |||||||||
| Map_info | Map | II | Position | -1.97788 | |||||
| Positive | Positive_clone | C55B8 | |||||||
| F58A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001023 | ||||||||
| WBPaper00025088 | |||||||||
| WBPaper00041549 | |||||||||
| WBPaper00057218 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
