WormBase Tree Display for Gene: WBGene00003589
expand all nodes | collapse all nodes | view schema
| WBGene00003589 | SMap | S_parent | Sequence | T07C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nex-2 | |||||||
| Sequence_name | T07C4.9 | ||||||||
| Molecular_name | T07C4.9a | ||||||||
| T07C4.9a.1 | |||||||||
| CE23956 | |||||||||
| T07C4.9b | |||||||||
| CE35364 | |||||||||
| T07C4.9b.1 | |||||||||
| Other_name | CELE_T07C4.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nex-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nex | ||||||||
| Allele (81) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted protein with annexin similarity. [CGC] | ||||||||
| Strain | WBStrain00031613 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00003588 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003591 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00003590 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | nex-2 encodes an annexin, a member of a family of calcium-dependent phospholipid binding proteins; by homology, NEX-2 could function in a number of processes, such as membrane fusion, cytoskeletal interactions, and intracellular signaling; however, as loss of nex-2 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of NEX-2 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00005654 | |||||||||
| WBPaper00005874 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables phospholipid binding activity and sulfur compound binding activity. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; carcinoma (multiple); and reproductive organ cancer (multiple). Is an ortholog of human ANXA7 (annexin A7). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | T07C4.9a | |||||||
| T07C4.9b | |||||||||
| Corresponding_transcript | T07C4.9a.1 | ||||||||
| T07C4.9b.1 | |||||||||
| Other_sequence (229) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052733 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022441 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080499 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114645 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035295 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087554 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007400 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1545 | ||||||||
| Chronogram1631 | |||||||||
| Expr6628 | |||||||||
| Expr8285 | |||||||||
| Expr1013118 | |||||||||
| Expr1031639 | |||||||||
| Expr1156342 | |||||||||
| Expr2013980 | |||||||||
| Expr2032220 | |||||||||
| Drives_construct | WBCnstr00002403 | ||||||||
| WBCnstr00036021 | |||||||||
| Construct_product | WBCnstr00036021 | ||||||||
| Antibody | WBAntibody00001199 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (223) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | III | Position | 2.32098 | Error | 0.002448 | |||
| Positive | Positive_clone | T07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5079 | |||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | III 2.4 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
