WormBase Tree Display for Gene: WBGene00003710
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| WBGene00003710 | SMap | S_parent | Sequence | C25B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-120 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C25B8.6 | ||||||||
| Molecular_name | C25B8.6 | ||||||||
| C25B8.6.1 | |||||||||
| CE30877 | |||||||||
| Other_name | CELE_C25B8.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nhr-120 | ||||||||
| DB_info | Database | AceView | gene | XH252 | |||||
| WormQTL | gene | WBGene00003710 | |||||||
| WormFlux | gene | WBGene00003710 | |||||||
| NDB | locus_tag | CELE_C25B8.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003710|UniProtKB=G5EET0 | |||||||
| family | PTHR24083 | ||||||||
| NCBI | gene | 182882 | |||||||
| RefSeq | protein | NM_076715.6 | |||||||
| TREEFAM | TREEFAM_ID | TF317146 | |||||||
| TrEMBL | UniProtAcc | G5EET0 | |||||||
| UniProt_GCRP | UniProtAcc | G5EET0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00036342 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (41) | |||||||||
| Paralog (55) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25B8.6 | |||||||
| Corresponding_transcript | C25B8.6.1 | ||||||||
| Other_sequence | ACC40632_1 | ||||||||
| Oden_isotig28808 | |||||||||
| FC547835.1 | |||||||||
| Associated_feature | WBsf670644 | ||||||||
| WBsf670645 | |||||||||
| WBsf716861 | |||||||||
| WBsf978416 | |||||||||
| WBsf1005608 | |||||||||
| WBsf1005609 | |||||||||
| WBsf1005610 | |||||||||
| WBsf1023124 | |||||||||
| WBsf1023125 | |||||||||
| WBsf237509 | |||||||||
| Transcription_factor | WBTranscriptionFactor000507 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00107231 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041166 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011149 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018970 | ||||||||
| Expr1145195 | |||||||||
| Expr2014019 | |||||||||
| Expr2032259 | |||||||||
| Drives_construct | WBCnstr00035927 | ||||||||
| Construct_product | WBCnstr00016811 | ||||||||
| WBCnstr00035927 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction | WBInteraction000146596 | ||||||||
| WBInteraction000285202 | |||||||||
| WBInteraction000306216 | |||||||||
| WBInteraction000322106 | |||||||||
| WBInteraction000356687 | |||||||||
| WBInteraction000363712 | |||||||||
| WBInteraction000419127 | |||||||||
| WBInteraction000437973 | |||||||||
| WBInteraction000535174 | |||||||||
| Map_info | Map | X | Position | -2.65274 | Error | 0.019346 | |||
| Positive | Positive_clone | C25B8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00034489 | |||||||||
| WBPaper00064415 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
