WormBase Tree Display for Gene: WBGene00003750
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| WBGene00003750 | SMap | S_parent | Sequence | M01D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nlp-12 | Person_evidence | WBPerson242 | |||||
| WBPerson11490 | |||||||||
| Sequence_name | M01D7.5 | ||||||||
| Molecular_name | M01D7.5 | ||||||||
| M01D7.5.1 | |||||||||
| CE12268 | |||||||||
| Other_name | cckp-1 | Person_evidence | WBPerson11490 | ||||||
| CELE_M01D7.5 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nlp-12 | ||||||||
| DB_info | Database | AceView | gene | 1C317 | |||||
| WormQTL | gene | WBGene00003750 | |||||||
| WormFlux | gene | WBGene00003750 | |||||||
| NDB | locus_tag | CELE_M01D7.5 | |||||||
| NCBI | gene | 171753 | |||||||
| RefSeq | protein | NM_058507.8 | |||||||
| TREEFAM | TREEFAM_ID | TF319405 | |||||||
| TrEMBL | UniProtAcc | O01970 | |||||||
| UniProt_GCRP | UniProtAcc | O01970 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | nlp-12 | ||||
| Other_name | cckp-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00031371 | ||||||||
| WBStrain00055074 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026316 | ||||||||
| 00026317 | |||||||||
| 00026318 | |||||||||
| 00026319 | |||||||||
| 00026320 | |||||||||
| 00026321 | |||||||||
| 00026322 | |||||||||
| Contained_in_operon | CEOP1993 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Concise_description | nlp-12 encodes two predicted neuropeptide-like proteins; nlp-12 is part of a LQFamide neuropeptide family that has members in at least one other nematode species; nlp-12 is expressed in one tail neuron. | Paper_evidence | WBPaper00004402 | |||||
| WBPaper00004975 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables cholecystokinin receptor binding activity. Involved in foraging behavior and neuropeptide signaling pathway. Located in neuron projection and neuronal cell body. Expressed in DVA; PVDL; PVDR; coelomocyte; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01D7.5 | |||||||
| Corresponding_transcript | M01D7.5.1 | ||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf643069 | ||||||||
| WBsf982769 | |||||||||
| WBsf217260 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern (13) | |||||||||
| Drives_construct (13) | |||||||||
| Construct_product (11) | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (164) | |||||||||
| Interaction (88) | |||||||||
| Map_info | Map | I | Position | -12.5151 | Error | 0.006865 | |||
| Positive | Positive_clone | M01D7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4286 | |||||||
| 4536 | |||||||||
| 5657 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (32) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
