WormBase Tree Display for Gene: WBGene00003791
expand all nodes | collapse all nodes | view schema
WBGene00003791 | SMap | S_parent | Sequence | F07A11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | npp | ||||||
Allele (69) | |||||||
Strain | WBStrain00036637 | ||||||
WBStrain00003837 | |||||||
WBStrain00003840 | |||||||
WBStrain00003841 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (37) | |||||||
Contained_in_operon | CEOP2718 | ||||||
Ortholog (31) | |||||||
Structured_description | Automated_description | Predicted to be a structural constituent of nuclear pore. Involved in several processes, including kinetochore assembly; protein localization to kinetochore; and regulation of nucleus size. Located in nuclear membrane. Part of nuclear pore. Human ortholog(s) of this gene implicated in Galloway-Mowat syndrome; nephrotic syndrome type 11; and ovarian dysgenesis 6. Is an ortholog of human NUP107 (nucleoporin 107). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080694 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29914) | ||
DOID:0080498 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29914) | ||||
DOID:0080385 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29914) | ||||
Molecular_info | Corresponding_CDS | F07A11.3 | |||||
Corresponding_transcript | F07A11.3.1 | ||||||
Other_sequence | CBC07538_1 | ||||||
CR03653 | |||||||
CRC05182_1 | |||||||
CR04595 | |||||||
CR03960 | |||||||
CRC05640_1 | |||||||
Associated_feature | WBsf650602 | ||||||
WBsf666172 | |||||||
WBsf223966 | |||||||
Experimental_info | RNAi_result (11) | ||||||
Expr_pattern | Expr1027606 | ||||||
Expr1031777 | |||||||
Expr1147819 | |||||||
Expr2014390 | |||||||
Expr2032631 | |||||||
Drives_construct | WBCnstr00035865 | ||||||
Construct_product | WBCnstr00005566 | ||||||
WBCnstr00014542 | |||||||
WBCnstr00035865 | |||||||
Antibody | WBAntibody00001891 | ||||||
WBAntibody00002304 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (110) | |||||||
Interaction (164) | |||||||
Map_info | Map | II | Position | 3.78634 | Error | 0.003937 | |
Positive | Positive_clone | F07A11 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00006202 | ||||||
WBPaper00026834 | |||||||
WBPaper00032497 | |||||||
WBPaper00036964 | |||||||
WBPaper00040620 | |||||||
WBPaper00040897 | |||||||
WBPaper00061547 | |||||||
WBPaper00063941 | |||||||
WBPaper00064641 | |||||||
WBPaper00065742 | |||||||
Remark | Sequence connection from [Askjaer P, Mattaj IW]. krb 13/11/01 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |