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WormBase Tree Display for Gene: WBGene00003807

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Name Class

WBGene00003807SMapS_parentSequenceC39E6
IdentityVersion1
NameCGC_namenpr-1Person_evidenceWBPerson42
Sequence_nameC39E6.6
Molecular_nameC39E6.6
C39E6.6.1
CE06941
Other_namebor-1
CELE_C39E6.6Accession_evidenceNDBBX284606
Public_namenpr-1
DB_infoDatabaseAceViewgeneXF386
WormQTLgeneWBGene00003807
WormFluxgeneWBGene00003807
NDBlocus_tagCELE_C39E6.6
PanthergeneCAEEL|WormBase=WBGene00003807|UniProtKB=Q18534
familyPTHR24235
NCBIgene180752
RefSeqproteinNM_076415.6
SwissProtUniProtAccQ18534
TREEFAMTREEFAM_IDTF350004
UniProt_GCRPUniProtAccQ18534
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoExperimental_modelDOID:1574Homo sapiensPaper_evidenceWBPaper00013487
Curator_confirmedWBPerson324
Date_last_updated20 May 2019 00:00:00
Potential_modelDOID:10763Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4464)
Models_disease_assertedWBDOannot00000661
Molecular_infoCorresponding_CDSC39E6.6
Corresponding_transcriptC39E6.6.1
Other_sequenceJI171129.1
JI169959.1
FE911148.1
JO474499.1
HBC05302_1
ASC37229_1
EX914218.1
Acan_isotig20791
JI172860.1
BMC11576_1
Associated_featureWBsf670459
WBsf1005064
WBsf1022847
WBsf237319
Experimental_infoRNAi_resultWBRNAi00091291Inferred_automaticallyRNAi_primary
WBRNAi00072197Inferred_automaticallyRNAi_primary
WBRNAi00042213Inferred_automaticallyRNAi_primary
WBRNAi00011783Inferred_automaticallyRNAi_primary
Expr_patternExpr1406
Expr1843
Expr2257
Expr11127
Expr12180
Expr13262
Expr1025782
Expr1146205
Expr2014405
Expr2032646
Drives_construct (13)
Construct_product (19)
Regulate_expr_clusterWBPaper00032196:npr-1(ad609)_downregulated
WBPaper00032196:npr-1(ad609)_upregulated
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049498:npr-1(ur89)_regulated_2
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049498:npr-1(ur89)_regulated_4
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049498:npr-1(ur89)_regulated_7
WBPaper00049498:npr-1(ur89)_regulated_8
Microarray_results (18)
Expression_clusterWBPaper00037950:all-neurons_larva_enriched
WBPaper00037950:all-neurons_larva_SelectivelyEnriched
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00048988:daf-16(mu86)_downregulated_neuron
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049377:MWCNT_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:B
WBPaper00061340:Excretory_gland
WBPaper00061340:g1A_g1P
WBPaper00061340:M_cell
WBPaper00061340:Neuroblast_AFD_RMD
WBPaper00061340:pm1_pm2
WBPaper00061340:Y
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:C25E10.11-F35H12.1
WBPaper00061651:VA12_enriched
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065158:AFD_enriched
WBPaper00065841:10_0
WBPaper00065841:36_2
WBPaper00065841:36_3
WBPaper00065841:39_2
WBPaper00065841:39_3
WBPaper00065841:50_0
WBPaper00065841:53_0
WBPaper00065841:60_0
WBPaper00065841:68_1
WBPaper00065841:90_0
WBPaper00065841:107_0
WBPaper00065841:122_0
WBPaper00065841:128_0
WBPaper00065841:130_0
WBPaper00065841:136_0
WBPaper00065841:137_0
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00036286:Pattern_H
WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045673:colistin_upregulated
WBPaper00046853:AOBr_LakeStobenseeAug_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00051387:Triclosan_upregulated
Interaction (108)
Anatomy_functionWBbtf0121
WBbtf0435
WBProcessWBbiopr:00000009
WBbiopr:00000039
Map_infoMapXPosition-6.65773Error0.026475
Well_ordered
PositiveInside_rearrsyDf1
Positive_cloneC39E6Inferred_automaticallyFrom sequence, transcript, pseudogene data
F10A4
Mapping_data2_point3635
3636
Multi_point3710
3711
4493
Pos_neg_data9424
Reference (223)
RemarkData extracted from de Bono and Bargmann (1998)
MethodGene