WormBase Tree Display for Gene: WBGene00003818
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| WBGene00003818 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nsf-1 | Person_evidence | WBPerson443 | |||||
| Sequence_name | H15N14.2 | ||||||||
| Molecular_name | H15N14.2a | ||||||||
| H15N14.2a.1 | |||||||||
| CE19925 | |||||||||
| H15N14.2b | |||||||||
| CE15513 | |||||||||
| H15N14.2b.1 | |||||||||
| Other_name | CELE_H15N14.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nsf-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nsf | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00005426 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (25) | |||||||||
| Ortholog (50) | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP hydrolysis activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in Golgi stack. Expressed in several structures, including egg-laying apparatus; excretory gland cell; intestinal cell; pharynx; and rectal gland cell. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 96. Is an ortholog of human NSF (N-ethylmaleimide sensitive factor, vesicle fusing ATPase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8016) | ||||
| Molecular_info | Corresponding_CDS | H15N14.2a | |||||||
| H15N14.2b | |||||||||
| Corresponding_transcript | H15N14.2a.1 | ||||||||
| H15N14.2b.1 | |||||||||
| Other_sequence (41) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr7983 | ||||||||
| Expr15228 | |||||||||
| Expr15391 | |||||||||
| Expr1027092 | |||||||||
| Expr1031797 | |||||||||
| Expr1153147 | |||||||||
| Expr2014447 | |||||||||
| Expr2032688 | |||||||||
| Drives_construct | WBCnstr00013044 | ||||||||
| WBCnstr00035852 | |||||||||
| Construct_product | WBCnstr00013044 | ||||||||
| WBCnstr00021855 | |||||||||
| WBCnstr00035852 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (197) | |||||||||
| Map_info | Map | I | Position | 2.33751 | Error | 0.007821 | |||
| Positive | Positive_clone | H15N14 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5665 | |||||||
| 4145 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Sequence connection from [Newman AP], [krb 020711] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
