WormBase Tree Display for Gene: WBGene00003859
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| WBGene00003859 | SMap | S_parent | Sequence | C09E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | oig-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C09E7.3 | ||||||||
| Molecular_name | C09E7.3 | ||||||||
| C09E7.3.1 | |||||||||
| CE23536 | |||||||||
| Other_name | C09E7.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_C09E7.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | oig-1 | ||||||||
| DB_info | Database | AceView | gene | 3H612 | |||||
| WormQTL | gene | WBGene00003859 | |||||||
| WormFlux | gene | WBGene00003859 | |||||||
| NDB | locus_tag | CELE_C09E7.3 | |||||||
| NCBI | gene | 182450 | |||||||
| RefSeq | protein | NM_066038.3 | |||||||
| SwissProt | UniProtAcc | Q9N5Z2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5Z2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oig | ||||||||
| Allele (28) | |||||||||
| Strain | WBStrain00002148 | ||||||||
| WBStrain00036436 | |||||||||
| WBStrain00037716 | |||||||||
| WBStrain00047363 | |||||||||
| WBStrain00047365 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095690 | ||||||||
| 00095691 | |||||||||
| 00095692 | |||||||||
| 00095693 | |||||||||
| 00095694 | |||||||||
| 00095695 | |||||||||
| 00095696 | |||||||||
| 00095697 | |||||||||
| Ortholog (15) | |||||||||
| Paralog | WBGene00043050 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be involved in nervous system development. Predicted to be located in extracellular region; membrane; and neuron projection. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C09E7.3 | |||||||
| Corresponding_transcript | C09E7.3.1 | ||||||||
| Other_sequence | CRC10323_1 | ||||||||
| ACC16026_1 | |||||||||
| CR05554 | |||||||||
| Name_isotig02563 | |||||||||
| Acan_isotig16187 | |||||||||
| FC540677.1 | |||||||||
| FC540742.1 | |||||||||
| Associated_feature | WBsf717919 | ||||||||
| WBsf992787 | |||||||||
| WBsf226842 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040189 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007110 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040190 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097920 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00001434 | ||||||||
| WBCnstr00001435 | |||||||||
| WBCnstr00001436 | |||||||||
| WBCnstr00001437 | |||||||||
| WBCnstr00001438 | |||||||||
| WBCnstr00002907 | |||||||||
| WBCnstr00017036 | |||||||||
| WBCnstr00022306 | |||||||||
| WBCnstr00035825 | |||||||||
| Construct_product | WBCnstr00020655 | ||||||||
| WBCnstr00020968 | |||||||||
| WBCnstr00021051 | |||||||||
| WBCnstr00022306 | |||||||||
| WBCnstr00035825 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000525407 | ||||||||
| WBInteraction000525408 | |||||||||
| WBInteraction000525409 | |||||||||
| WBInteraction000534833 | |||||||||
| WBInteraction000534834 | |||||||||
| WBInteraction000541824 | |||||||||
| WBInteraction000576768 | |||||||||
| Map_info | Map | III | Position | -1.09923 | Error | 0.004864 | |||
| Positive | Positive_clone | C09E7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00042846 | ||||||||
| WBPaper00043839 | |||||||||
| WBPaper00046950 | |||||||||
| WBPaper00048350 | |||||||||
| WBPaper00048563 | |||||||||
| WBPaper00053207 | |||||||||
| WBPaper00055155 | |||||||||
| WBPaper00056064 | |||||||||
| WBPaper00061622 | |||||||||
| Remark | Sequence connection from [Aurelio O, Hobert O] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
