WormBase Tree Display for Gene: WBGene00004075
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| WBGene00004075 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pod-1 | Person_evidence | WBPerson26 | |||||
| Sequence_name | Y76A2B.1 | ||||||||
| Molecular_name (14) | |||||||||
| Other_name | CELE_Y76A2B.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pod-1 | ||||||||
| DB_info | Database | AceView | gene | 3O604 | |||||
| WormQTL | gene | WBGene00004075 | |||||||
| SignaLink | protein | WBGene00004075 | |||||||
| WormFlux | gene | WBGene00004075 | |||||||
| NDB | locus_tag | CELE_Y76A2B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004075|UniProtKB=K8ESK9 | |||||||
| family | PTHR10856 | ||||||||
| NCBI | gene | 176784 | |||||||
| RefSeq | protein | NM_067396.6 | |||||||
| NM_001276806.2 | |||||||||
| NM_001276804.3 | |||||||||
| NM_001276805.5 | |||||||||
| TrEMBL | UniProtAcc | K8FE00 | |||||||
| K8ESK9 | |||||||||
| K8F7Z0 | |||||||||
| G5EDS2 | |||||||||
| UniProt_GCRP | UniProtAcc | K8ESK9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pod | ||||||||
| Allele (123) | |||||||||
| Strain | WBStrain00008566 | ||||||||
| WBStrain00051669 | |||||||||
| WBStrain00051678 | |||||||||
| WBStrain00055432 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP3808 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00000768 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The pod-1 gene encodes a coronin-like protein required for asymmetry along the anterior-posterior axis at the beginning of embryonic development. | Paper_evidence | WBPaper00002796 | |||||
| WBPaper00003758 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables actin filament binding activity. Located in cell cortex of cell tip and cleavage furrow. Is an ortholog of human CORO7 (coronin 7). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y76A2B.1a | |||||||
| Y76A2B.1b | |||||||||
| Y76A2B.1c | |||||||||
| Y76A2B.1d | |||||||||
| Corresponding_transcript | Y76A2B.1a.1 | ||||||||
| Y76A2B.1b.1 | |||||||||
| Y76A2B.1c.1 | |||||||||
| Y76A2B.1c.2 | |||||||||
| Y76A2B.1d.1 | |||||||||
| Y76A2B.1d.2 | |||||||||
| Other_sequence (49) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058485 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085845 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113793 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115698 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078554 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091269 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009425 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058486 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026959 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027877 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1162 | ||||||||
| Expr1015426 | |||||||||
| Expr1031964 | |||||||||
| Expr1161898 | |||||||||
| Expr2014987 | |||||||||
| Expr2033222 | |||||||||
| Antibody | WBAntibody00000245 | ||||||||
| WBAntibody00000881 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Map | III | Position | 21.2562 | Error | 0.002167 | |||
| Positive | Positive_clone | Y76A2B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5295 | |||||||
| 5609 | |||||||||
| Pos_neg_data | 10545 | ||||||||
| Reference | WBPaper00002796 | ||||||||
| WBPaper00003758 | |||||||||
| WBPaper00004115 | |||||||||
| WBPaper00004230 | |||||||||
| WBPaper00004333 | |||||||||
| WBPaper00004403 | |||||||||
| WBPaper00004519 | |||||||||
| WBPaper00004706 | |||||||||
| WBPaper00004883 | |||||||||
| WBPaper00006320 | |||||||||
| WBPaper00006462 | |||||||||
| WBPaper00011680 | |||||||||
| WBPaper00016994 | |||||||||
| WBPaper00017083 | |||||||||
| WBPaper00017951 | |||||||||
| WBPaper00018368 | |||||||||
| WBPaper00018618 | |||||||||
| WBPaper00023672 | |||||||||
| WBPaper00024118 | |||||||||
| WBPaper00024324 | |||||||||
| WBPaper00026821 | |||||||||
| WBPaper00033119 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061290 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00061698 | |||||||||
| WBPaper00061907 | |||||||||
| Remark | Gmap position has to be right of eP81, left of unc-64 based on clone map and fmap. [sdm 000908].it also helps define left end of tDf10 which deletes it [Schnabel H. 000908] | ||||||||
| Seuence connection from [Rappleye CA, Aroian RV] | |||||||||
| Method | Gene |
