WormBase Tree Display for Gene: WBGene00004075
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WBGene00004075 | SMap | S_parent | Sequence | CHROMOSOME_III | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pod | ||||||
Allele (123) | |||||||
Strain | WBStrain00008566 | ||||||
WBStrain00051669 | |||||||
WBStrain00051678 | |||||||
WBStrain00055432 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Contained_in_operon | CEOP3808 | ||||||
Ortholog (35) | |||||||
Paralog | WBGene00000768 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | The pod-1 gene encodes a coronin-like protein required for asymmetry along the anterior-posterior axis at the beginning of embryonic development. | Paper_evidence | WBPaper00002796 | |||
WBPaper00003758 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables actin filament binding activity. Located in cell cortex of cell tip and cleavage furrow. Is an ortholog of human CORO7 (coronin 7). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y76A2B.1a | |||||
Y76A2B.1b | |||||||
Y76A2B.1c | |||||||
Y76A2B.1d | |||||||
Corresponding_transcript | Y76A2B.1a.1 | ||||||
Y76A2B.1b.1 | |||||||
Y76A2B.1c.1 | |||||||
Y76A2B.1c.2 | |||||||
Y76A2B.1d.1 | |||||||
Y76A2B.1d.2 | |||||||
Other_sequence (49) | |||||||
Associated_feature (16) | |||||||
Experimental_info | RNAi_result | WBRNAi00058485 | Inferred_automatically | RNAi_primary | |||
WBRNAi00085845 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113793 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115698 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078554 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00091269 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009425 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058486 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026959 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027877 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1162 | ||||||
Expr1015426 | |||||||
Expr1031964 | |||||||
Expr1161898 | |||||||
Expr2014987 | |||||||
Expr2033222 | |||||||
Antibody | WBAntibody00000245 | ||||||
WBAntibody00000881 | |||||||
Microarray_results (24) | |||||||
Expression_cluster (139) | |||||||
Interaction (57) | |||||||
Map_info | Map | III | Position | 21.2562 | Error | 0.002167 | |
Positive | Positive_clone | Y76A2B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5295 | |||||
5609 | |||||||
Pos_neg_data | 10545 | ||||||
Reference (28) | |||||||
Remark | Gmap position has to be right of eP81, left of unc-64 based on clone map and fmap. [sdm 000908].it also helps define left end of tDf10 which deletes it [Schnabel H. 000908] | ||||||
Seuence connection from [Rappleye CA, Aroian RV] | |||||||
Method | Gene |