WormBase Tree Display for Gene: WBGene00004169
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| WBGene00004169 | SMap | S_parent | Sequence | Y73B6BR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-89 | Person_evidence | WBPerson625 | |||||
| Sequence_name | Y73B6BR.1 | ||||||||
| Molecular_name | Y73B6BR.1a | ||||||||
| Y73B6BR.1a.1 | |||||||||
| CE25586 | |||||||||
| Y73B6BR.1b | |||||||||
| CE42205 | |||||||||
| Y73B6BR.1b.1 | |||||||||
| Other_name | Y73B6BR.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y73B6BR.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | pqn-89 | ||||||||
| DB_info | Database | AceView | gene | 4H275 | |||||
| WormQTL | gene | WBGene00004169 | |||||||
| WormFlux | gene | WBGene00004169 | |||||||
| NDB | locus_tag | CELE_Y73B6BR.1 | |||||||
| NCBI | gene | 177412 | |||||||
| RefSeq | protein | NM_001028406.6 | |||||||
| NM_001383105.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF315427 | |||||||
| TrEMBL | UniProtAcc | Q86DD5 | |||||||
| Q9N2X8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9N2X8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083243 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00017447 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y73B6BR.1a | |||||||
| Y73B6BR.1b | |||||||||
| Corresponding_CDS_history | Y73B6BR.1b:wp187 | ||||||||
| Corresponding_transcript | Y73B6BR.1a.1 | ||||||||
| Y73B6BR.1b.1 | |||||||||
| Other_sequence | CBC01697_1 | ||||||||
| Name_isotig07450 | |||||||||
| OOC00846_1 | |||||||||
| Dviv_isotig29472 | |||||||||
| Associated_feature | WBsf716779 | ||||||||
| WBsf717148 | |||||||||
| WBsf718108 | |||||||||
| WBsf996760 | |||||||||
| WBsf996761 | |||||||||
| WBsf1017533 | |||||||||
| WBsf1017534 | |||||||||
| WBsf228417 | |||||||||
| WBsf228418 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037801 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058347 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020295 | ||||||||
| Expr1032033 | |||||||||
| Expr1161764 | |||||||||
| Expr2015080 | |||||||||
| Expr2033316 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (206) | |||||||||
| Interaction | WBInteraction000005605 | ||||||||
| WBInteraction000580267 | |||||||||
| Map_info | Map | IV | Position | 3.203 | Error | 0.000188 | |||
| Positive | Positive_clone | Y73B6BR | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
