WormBase Tree Display for Gene: WBGene00004317
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| WBGene00004317 | Evidence | Person_evidence | WBPerson451 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F20D1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | rbg-1 | Person_evidence | WBPerson451 | |||||
| Sequence_name | F20D1.6 | ||||||||
| Molecular_name | F20D1.6 | ||||||||
| F20D1.6.1 | |||||||||
| CE09499 | |||||||||
| Other_name | Rab3-GAP | Paper_evidence | WBPaper00046401 | ||||||
| CELE_F20D1.6 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | rbg-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rbg | ||||||||
| Allele (71) | |||||||||
| Strain | WBStrain00032151 | ||||||||
| WBStrain00032164 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activator activity and small GTPase binding activity. Involved in amyloid fibril formation; autophagy; and positive regulation of autophagosome assembly. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Warburg micro syndrome 1. Is an ortholog of human RAB3GAP1 (RAB3 GTPase activating protein catalytic subunit 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110716 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17063) | ||||
| EFO:MONDO:0023910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17063) | ||||||
| Molecular_info | Corresponding_CDS | F20D1.6 | |||||||
| Corresponding_transcript | F20D1.6.1 | ||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf648783 | ||||||||
| WBsf982296 | |||||||||
| WBsf1008059 | |||||||||
| WBsf1008060 | |||||||||
| WBsf1024494 | |||||||||
| WBsf236745 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045097 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013615 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026628 | ||||||||
| Expr1032142 | |||||||||
| Expr1149047 | |||||||||
| Expr2015268 | |||||||||
| Expr2033502 | |||||||||
| Drives_construct | WBCnstr00035568 | ||||||||
| Construct_product | WBCnstr00020608 | ||||||||
| WBCnstr00035568 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction | WBInteraction000352925 | ||||||||
| WBInteraction000384894 | |||||||||
| WBInteraction000403440 | |||||||||
| WBInteraction000525113 | |||||||||
| WBInteraction000540913 | |||||||||
| WBInteraction000560273 | |||||||||
| WBInteraction000573525 | |||||||||
| WBInteraction000574476 | |||||||||
| Map_info | Map | X | Position | 21.7096 | Error | 0.025122 | |||
| Positive | Positive_clone | F20D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5568 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046401 | |||||||||
| WBPaper00046486 | |||||||||
| WBPaper00048041 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
