WormBase Tree Display for Gene: WBGene00004370
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| WBGene00004370 | Evidence | Person_evidence | WBPerson1103 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C53B7 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | rig-3 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | C53B7.1 | ||||||||
| Molecular_name | C53B7.1 | ||||||||
| C53B7.1.1 | |||||||||
| CE06971 | |||||||||
| Other_name | CELE_C53B7.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | rig-3 | ||||||||
| DB_info | Database | AceView | gene | XH479 | |||||
| WormQTL | gene | WBGene00004370 | |||||||
| WormFlux | gene | WBGene00004370 | |||||||
| NDB | locus_tag | CELE_C53B7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004370|UniProtKB=Q18806 | |||||||
| family | PTHR10075 | ||||||||
| NCBI | gene | 180958 | |||||||
| RefSeq | protein | NM_076754.5 | |||||||
| SwissProt | UniProtAcc | Q18806 | |||||||
| UniProt_GCRP | UniProtAcc | Q18806 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rig | ||||||||
| Allele (120) | |||||||||
| Possibly_affected_by | WBVar02157850 | ||||||||
| Strain | WBStrain00032404 | ||||||||
| WBStrain00055148 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable cell-cell adhesion mediator activity. Predicted to be involved in axon guidance; dendrite self-avoidance; and homophilic cell adhesion via plasma membrane adhesion molecules. Located in axon and synapse. Expressed in several structures, including AVA; amphid sheath cell; coelomocyte; pharyngeal neurons; and somatic nervous system. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53B7.1 | |||||||
| Corresponding_transcript | C53B7.1.1 | ||||||||
| Other_sequence | CR01608 | ||||||||
| CRC00380_1 | |||||||||
| JI459679.1 | |||||||||
| JI479520.1 | |||||||||
| Associated_feature | WBsf662919 | ||||||||
| WBsf662920 | |||||||||
| WBsf662921 | |||||||||
| WBsf1005658 | |||||||||
| WBsf1005659 | |||||||||
| WBsf1005660 | |||||||||
| WBsf235879 | |||||||||
| WBsf235880 | |||||||||
| WBsf235881 | |||||||||
| WBsf235882 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030105 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012348 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089663 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043077 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1759 | ||||||||
| Expr8846 | |||||||||
| Expr9609 | |||||||||
| Expr13942 | |||||||||
| Expr16092 | |||||||||
| Expr1025262 | |||||||||
| Expr1032183 | |||||||||
| Expr1147040 | |||||||||
| Expr2015352 | |||||||||
| Expr2033586 | |||||||||
| Drives_construct (29) | |||||||||
| Construct_product | WBCnstr00008833 | ||||||||
| WBCnstr00014171 | |||||||||
| WBCnstr00018032 | |||||||||
| WBCnstr00035532 | |||||||||
| WBCnstr00040462 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | X | Position | -2.32949 | Error | 0.004063 | |||
| Positive | Positive_clone | C53B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
