WormBase Tree Display for Gene: WBGene00004371

WBGene00004371 Evidence: Person_evidence: WBPerson1103
  SMap: S_parent: Sequence: Y42H9B
  Identity: Version: 1
    Name: CGC_name: rig-4 Person_evidence: WBPerson1103
      Sequence_name: Y42H9B.2
      Molecular_name: Y42H9B.2
        Y42H9B.2.1
        CE33870
      Other_name: Y42H9B.b Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y42H9B.2 Accession_evidence: NDB BX284604
      Public_name: rig-4
    DB_info: Database: AceView gene 4I756
        WormQTL gene WBGene00004371
        WormFlux gene WBGene00004371
        NDB locus_tag CELE_Y42H9B.2
        Panther gene CAEEL|WormBase=WBGene00004371|UniProtKB=Q9N3X8
          family PTHR13817
        NCBI gene 177597
        RefSeq protein NM_068938.9
        SwissProt UniProtAcc Q9N3X8
        TREEFAM TREEFAM_ID TF316846
        UniProt_GCRP UniProtAcc Q9N3X8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rig
    Allele (169)
    Strain: WBStrain00031841
    RNASeq_FPKM (74)
    GO_annotation: 00094073
      00094074
      00094075
      00094076
    Ortholog (46)
    Paralog (19)
    Structured_description: Automated_description: Predicted to be involved in cell adhesion. Predicted to be located in membrane. Expressed in several structures, including DA neuron; excretory cell; somatic neurons; spermathecal-uterine junction; and vulva. Is an ortholog of human SDK1 (sidekick cell adhesion molecule 1) and SDK2 (sidekick cell adhesion molecule 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y42H9B.2
    Corresponding_CDS_history: Y42H9B.2:wp98
    Corresponding_transcript: Y42H9B.2.1
    Other_sequence (19)
    Associated_feature (21)
  Experimental_info: RNAi_result: WBRNAi00056451 Inferred_automatically: RNAi_primary
      WBRNAi00080536 Inferred_automatically: RNAi_primary
      WBRNAi00056450 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1768
      Expr8847
      Expr1011118
      Expr1032184
      Expr1159924
      Expr2015353
      Expr2033587
    Drives_construct: WBCnstr00001455
      WBCnstr00001456
      WBCnstr00013557
      WBCnstr00035531
    Construct_product: WBCnstr00035531
    Microarray_results (17)
    Expression_cluster (156)
    Interaction: WBInteraction000540415
  Map_info: Map: IV Position: 3.57712 Error: 0.001164
    Positive: Positive_clone: Y42H9B Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4932
        4999
    Pseudo_map_position
  Reference: WBPaper00011412
    WBPaper00019313
    WBPaper00024200
    WBPaper00024722
    WBPaper00032446
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene