WormBase Tree Display for Gene: WBGene00004727
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| WBGene00004727 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R11G1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sax-1 | Person_evidence | WBPerson42 | |||||
| Sequence_name | R11G1.4 | ||||||||
| Molecular_name | R11G1.4a | ||||||||
| R11G1.4a.1 | |||||||||
| CE39615 | |||||||||
| R11G1.4b | |||||||||
| CE39616 | |||||||||
| R11G1.4b.1 | |||||||||
| Other_name | CELE_R11G1.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sax-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sax | ||||||||
| Allele (58) | |||||||||
| Strain | WBStrain00005260 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00080355 | ||||||||
| 00080356 | |||||||||
| 00080357 | |||||||||
| 00080358 | |||||||||
| 00080359 | |||||||||
| 00080360 | |||||||||
| 00080361 | |||||||||
| 00080362 | |||||||||
| 00080363 | |||||||||
| 00080364 | |||||||||
| 00080365 | |||||||||
| 00080366 | |||||||||
| 00080367 | |||||||||
| 00080368 | |||||||||
| 00080369 | |||||||||
| 00080370 | |||||||||
| 00080371 | |||||||||
| 00080372 | |||||||||
| 00080373 | |||||||||
| 00080374 | |||||||||
| 00080375 | |||||||||
| 00080376 | |||||||||
| 00080377 | |||||||||
| 00080378 | |||||||||
| 00080379 | |||||||||
| 00080380 | |||||||||
| 00080381 | |||||||||
| 00113098 | |||||||||
| 00113099 | |||||||||
| 00113100 | |||||||||
| 00113101 | |||||||||
| Ortholog (40) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Involved in several processes, including cell projection organization; negative regulation of cell growth; and regulation of cell shape. Located in cytoplasm; neuron projection; and nucleus. Expressed in hypodermis; muscle cell; nerve ring; and seam cell. Is an ortholog of human STK38 (serine/threonine kinase 38). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11G1.4a | |||||||
| R11G1.4b | |||||||||
| Corresponding_CDS_history | R11G1.4a:wp153 | ||||||||
| R11G1.4b:wp153 | |||||||||
| Corresponding_transcript | R11G1.4a.1 | ||||||||
| R11G1.4b.1 | |||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf653856 | ||||||||
| WBsf655646 | |||||||||
| WBsf670353 | |||||||||
| WBsf670354 | |||||||||
| WBsf670355 | |||||||||
| WBsf1004683 | |||||||||
| WBsf1004684 | |||||||||
| WBsf1022649 | |||||||||
| WBsf237199 | |||||||||
| WBsf237200 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051802 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00078437 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1070 | ||||||||
| Expr1028709 | |||||||||
| Expr1032331 | |||||||||
| Expr1155462 | |||||||||
| Expr2015606 | |||||||||
| Expr2033841 | |||||||||
| Drives_construct | WBCnstr00010063 | ||||||||
| WBCnstr00035426 | |||||||||
| Construct_product | WBCnstr00010063 | ||||||||
| WBCnstr00035426 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (79) | |||||||||
| Map_info | Map | X | Position | -9.90582 | Error | 0.018594 | |||
| Positive | Positive_clone | R11G1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Pos_neg_data | 10667 | |||||||
| Reference (29) | |||||||||
| Remark | Sequence connection from [Zallen JA] | ||||||||
| Description and Allels (ky123, ky198, ky203) data inferred from Zallen JA, Kirch SA, Bargmann CI [ck1 020828] | |||||||||
| Method | Gene |
