WormBase Tree Display for Gene: WBGene00004727

WBGene00004727 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: R11G1
  Identity: Version: 1
    Name: CGC_name: sax-1 Person_evidence: WBPerson42
      Sequence_name: R11G1.4
      Molecular_name: R11G1.4a
        R11G1.4a.1
        CE39615
        R11G1.4b
        CE39616
        R11G1.4b.1
      Other_name: CELE_R11G1.4 Accession_evidence: NDB BX284606
      Public_name: sax-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sax
    Allele (58)
    Strain: WBStrain00005260
    RNASeq_FPKM (74)
    GO_annotation (31)
    Ortholog: WBGene00051944 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034813 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00159208 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126478 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00212855 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00225615 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2427 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13127 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18743 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10445 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g426 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1796 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g391 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9484 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20545 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22478 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-sax-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18205 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00003.g182 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00797 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024137 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07496 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g2092 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0267100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18788 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00249019 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00276844 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00266861 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290698 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005105 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0003744 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-798 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-2811 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-081031-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17847 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17848 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      MGI:2442572 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1922250 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      RGD:1309455 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1564793 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Involved in several processes, including cell projection organization; negative regulation of cell growth; and regulation of cell shape. Located in cytoplasm; neuron projection; and nucleus. Expressed in hypodermis; muscle cell; nerve ring; and seam cell. Is an ortholog of human STK38 (serine/threonine kinase 38). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R11G1.4a
      R11G1.4b
    Corresponding_CDS_history: R11G1.4a:wp153
      R11G1.4b:wp153
    Corresponding_transcript: R11G1.4a.1
      R11G1.4b.1
    Other_sequence (53)
    Associated_feature: WBsf653856
      WBsf655646
      WBsf670353
      WBsf670354
      WBsf670355
      WBsf1004683
      WBsf1004684
      WBsf1022649
      WBsf237199
      WBsf237200
  Experimental_info: RNAi_result: WBRNAi00051802 Inferred_automatically: RNAi_primary
      WBRNAi00078437 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1070
      Expr1028709
      Expr1032331
      Expr1155462
      Expr2015606
      Expr2033841
    Drives_construct: WBCnstr00010063
      WBCnstr00035426
    Construct_product: WBCnstr00010063
      WBCnstr00035426
    Microarray_results (26)
    Expression_cluster (136)
    Interaction (79)
  Map_info: Map: X Position: -9.90582 Error: 0.018594
    Positive: Positive_clone: R11G1 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Pos_neg_data: 10667
  Reference (29)
  Remark: Sequence connection from [Zallen JA]
    Description and Allels (ky123, ky198, ky203) data inferred from Zallen JA, Kirch SA, Bargmann CI [ck1 020828]
  Method: Gene