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WormBase Tree Display for Gene: WBGene00004858

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Name Class

WBGene00004858SMapS_parentSequenceR12B2
IdentityVersion1
NameCGC_namesma-4Person_evidenceWBPerson261
Sequence_nameR12B2.1
Molecular_nameR12B2.1a
R12B2.1a.1
CE25077
R12B2.1b
CE39618
R12B2.1a.2
R12B2.1b.1
Other_nameCELE_R12B2.1Accession_evidenceNDBBX284603
Public_namesma-4
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoPotential_model (23)
Molecular_infoCorresponding_CDSR12B2.1a
R12B2.1b
Corresponding_CDS_historyR12B2.1:wp153
Corresponding_transcriptR12B2.1a.1
R12B2.1a.2
R12B2.1b.1
Other_sequence (19)
Associated_featureWBsf645214
WBsf978482
WBsf992539
WBsf1014960
WBsf225002
WBsf225003
Transcription_factorWBTranscriptionFactor001046
Experimental_infoRNAi_result (17)
Expr_patternExpr7640
Expr1013575
Expr1032410
Expr1155487
Expr2015894
Expr2034127
Drives_constructWBCnstr00012785
WBCnstr00035352
Construct_productWBCnstr00035352
Regulate_expr_clusterWBPaper00037682:sma-2_sma-4_downregulated
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
Microarray_results (29)
Expression_clusterWBPaper00031040:Cluster_3
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045140:aging_dynamic_regulation
WBPaper00045521:Gender_Neutral
WBPaper00045729:gld-2(RNAi)_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046338:intestine_unique
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00050094:mes-2(bn11)_upregulated
WBPaper00050094:mes-6(bn66)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:intestine_enriched
WBPaper00051257:Levamisole_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056167:Cry5B_downregulated
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058942:henn-1(pk2295)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059440:GLP-1_represseded
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061274:microgravity_downregulated
WBPaper00061340:g1A_parent
WBPaper00061340:OLQ_grandparent
WBPaper00061340:OLQ_parent
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061340:pm6
WBPaper00061340:pm7
WBPaper00061340:XXX
WBPaper00061341:28C_24h_upregulated
WBPaper00061478:pie-1(ne4433)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:C32F10.4-D1086.2
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
cgc4489_group_8
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00032948:StarveUp2
WBPaper00033101:spr-5_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042236:flcn-1(ok975)_upregulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00044013:nasp-1_downregulated
WBPaper00044091:Bpseudomallei_induced_2h
WBPaper00044091:Bpseudomallei_induced_8h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00047070:N2_starvation_upregulated
WBPaper00048567:dnj-14_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00055899:nitroguanidine_regulated
Interaction (205)
WBProcessWBbiopr:00000025
WBbiopr:00000039
Map_infoMapIIIPosition-1.43987Error0.00065
Well_ordered
PositivePositive_cloneR12B2Inferred_automaticallyFrom sequence, transcript, pseudogene data
W03A3
Mapping_data2_point63
6133
7029
Multi_point (11)
Pos_neg_data2712
2713
7310
8705
8734
8764
8766
8833
Reference (138)
PictureWBPicture0000013077
MethodGene