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WormBase Tree Display for Gene: WBGene00004879

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Name Class

WBGene00004879SMapS_parentSequenceC48B6
IdentityVersion1
NameCGC_namesmg-1Person_evidenceWBPerson261
Sequence_nameC48B6.6
Molecular_nameC48B6.6a
C48B6.6a.1
CE30258
C48B6.6b
CE53740
C48B6.6b.1
Other_namemab-1
CELE_C48B6.6Accession_evidenceNDBBX284601
Public_namesmg-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (12)
Molecular_infoCorresponding_CDSC48B6.6a
C48B6.6b
Corresponding_CDS_historyC48B6.6:wp126
C48B6.6b:wp273
Corresponding_transcriptC48B6.6a.1
C48B6.6b.1
Other_sequence (18)
Associated_featureWBsf664370
WBsf664371
WBsf664372
WBsf664373
WBsf984028
WBsf1010005
WBsf219650
WBsf219651
Experimental_infoRNAi_result (20)
Expr_patternExpr1024290
Expr1032418
Expr1146716
Expr2015907
Expr2034140
Construct_productWBCnstr00007260
Regulate_expr_clusterWBPaper00053308:NMD(-)_downregulated_SMD-2_non-binding_ClassIV
WBPaper00053308:NMD(-)_upregulated_SMD-2_non-binding_ClassIII
AntibodyWBAntibody00000757
WBAntibody00002206
Microarray_results (29)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:all-neurons_embryo_enriched
WBPaper00037950:AVA-neuron_embryo_enriched
WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00040420:ALM_PLM_enriched
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(gk119)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053814:25C_downregulated_PY79
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055103:thoc-5(wy822)_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:gpb-1_3783-C48A7.2_22459
WBPaper00061527:npp-8_4355-afd-1_4796
WBPaper00061527:trcs-2_5724-R11A8.7_17645
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062056:lin-36(we31)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
WBPaper00065975:P-body_vs_oocyte_depleted
cgc4489_group_2
cgc4489_group_9
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025032:cluster_39
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031832:slr-2_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00034661:AgNPs_downregulated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00041002:HF_3d_0.2mM_Down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00055435:AuNPs_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (70)
Map_infoMapIPosition1.48161Error0.009583
Well_ordered
PositivePositive_cloneC48B6Inferred_automaticallyFrom sequence, transcript, pseudogene data
F56F2
Mapping_data2_point328
Multi_point204
1889
1890
2089
5509
Reference (133)
Remark[Pulak R] n2088 may be a deficiency, nDf48
Sequence connection from [O'Connor SL, Anderson RP] based on EMBL:AF149821
MethodGene