WormBase Tree Display for Gene: WBGene00004903
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| WBGene00004903 | Evidence | CGC_data_submission | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y46G5A | |||||||
| Identity | Version | 2 | ||||||||
| Name | CGC_name | snf-4 | Person_evidence | WBPerson508 | ||||||
| Sequence_name | Y46G5A.25 | |||||||||
| Molecular_name | Y46G5A.25 | |||||||||
| Other_name | CELE_Y46G5A.25 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | snf-4 | |||||||||
| DB_info | Database | AceView | gene | 2N124 | ||||||
| WormQTL | gene | WBGene00004903 | ||||||||
| NDB | locus_tag | CELE_Y46G5A.25 | ||||||||
| NCBI | gene | 174919 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 27 Nov 2008 12:11:21 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | snf | |||||||||
| Allele (84) | ||||||||||
| Strain | WBStrain00031458 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00004901 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by fourteen chemicals including hydrogen sulfide; Ethanol; and methylmercuric chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y46G5A.25:wp124 | ||||||||
| Y46G5A.25:wp197 | ||||||||||
| Corresponding_pseudogene | Y46G5A.25 | |||||||||
| Other_sequence | CR10627 | |||||||||
| DVC00040_1 | ||||||||||
| CRC10750_1 | ||||||||||
| EV854162.1 | ||||||||||
| Associated_feature | WBsf224112 | |||||||||
| Experimental_info | Microarray_results (12) | |||||||||
| Expression_cluster (74) | ||||||||||
| Interaction | WBInteraction000274023 | |||||||||
| WBInteraction000383367 | ||||||||||
| WBInteraction000395119 | ||||||||||
| WBInteraction000401019 | ||||||||||
| WBInteraction000406673 | ||||||||||
| WBInteraction000416360 | ||||||||||
| WBInteraction000445312 | ||||||||||
| WBInteraction000463741 | ||||||||||
| WBInteraction000473990 | ||||||||||
| WBInteraction000475069 | ||||||||||
| Map_info | Map | II | Position | 11.4015 | Error | 0.060723 | ||||
| Positive | Positive_clone | Y46G5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | Multi_point | 4673 | ||||||||
| 4674 | ||||||||||
| 5028 | ||||||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00015781 | |||||||||
| WBPaper00043908 | ||||||||||
| Remark | Sequence connection from [Rand JB] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||||
| Method | Gene |
