WormBase Tree Display for Gene: WBGene00005027
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| WBGene00005027 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | AH6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-1 | Person_evidence | WBPerson42 | |||||
| Sequence_name | AH6.4 | ||||||||
| Molecular_name | AH6.4 | ||||||||
| AH6.4.1 | |||||||||
| CE01458 | |||||||||
| Other_name | CELE_AH6.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-1 | ||||||||
| DB_info | Database | AceView | gene | 2J806 | |||||
| WormQTL | gene | WBGene00005027 | |||||||
| WormFlux | gene | WBGene00005027 | |||||||
| NDB | locus_tag | CELE_AH6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005027|UniProtKB=Q09203 | |||||||
| family | PTHR31357 | ||||||||
| NCBI | gene | 191772 | |||||||
| RefSeq | protein | NM_063641.4 | |||||||
| SwissProt | UniProtAcc | Q09203 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | Q09203 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (21) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. sra-1:GFP expressed in male spicule neurons SPD/SPV. sra-1 to sra-9 clustered. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00002567 | ||||||||
| WBStrain00033332 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052853 | ||||||||
| 00052854 | |||||||||
| 00052855 | |||||||||
| 00052856 | |||||||||
| 00052857 | |||||||||
| 00052858 | |||||||||
| 00113446 | |||||||||
| 00113447 | |||||||||
| 00113448 | |||||||||
| Ortholog (41) | |||||||||
| Paralog (34) | |||||||||
| Structured_description | Concise_description | sra-1 encodes a predicted seven transmembrane receptor; expressed in the male SPD and SPV neurons. | Paper_evidence | WBPaper00002314 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 16 Feb 2005 00:00:00 | ||||||||
| Automated_description | Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | AH6.4 | |||||||
| Corresponding_transcript | AH6.4.1 | ||||||||
| Associated_feature | WBsf223661 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00038622 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009531 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009532 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1140 | ||||||||
| Expr293 | |||||||||
| Expr1012555 | |||||||||
| Expr1142830 | |||||||||
| Expr2016134 | |||||||||
| Expr2034369 | |||||||||
| Drives_construct | WBCnstr00004428 | ||||||||
| WBCnstr00011023 | |||||||||
| WBCnstr00020944 | |||||||||
| WBCnstr00035258 | |||||||||
| WBCnstr00038323 | |||||||||
| Construct_product | WBCnstr00011023 | ||||||||
| WBCnstr00035258 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (17) | |||||||||
| Interaction | WBInteraction000134118 | ||||||||
| WBInteraction000135608 | |||||||||
| WBInteraction000343119 | |||||||||
| Map_info | Map | II | Position | 1.49098 | Error | 0.003152 | |||
| Positive | Positive_clone | AH6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00004489 | |||||||||
| WBPaper00005965 | |||||||||
| WBPaper00012979 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00017095 | |||||||||
| WBPaper00023294 | |||||||||
| WBPaper00024667 | |||||||||
| WBPaper00026629 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
