WormBase Tree Display for Gene: WBGene00005030
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| WBGene00005030 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | AH6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-4 | Person_evidence | WBPerson42 | |||||
| Sequence_name | AH6.8 | ||||||||
| Molecular_name | AH6.8 | ||||||||
| AH6.8.1 | |||||||||
| CE01462 | |||||||||
| Other_name | CELE_AH6.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-4 | ||||||||
| DB_info | Database | AceView | gene | 2J830 | |||||
| WormQTL | gene | WBGene00005030 | |||||||
| WormFlux | gene | WBGene00005030 | |||||||
| NDB | locus_tag | CELE_AH6.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005030|UniProtKB=Q09206 | |||||||
| family | PTHR31357 | ||||||||
| NCBI | gene | 191775 | |||||||
| RefSeq | protein | NM_063648.2 | |||||||
| SwissProt | UniProtAcc | Q09206 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | Q09206 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (22) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. sra-1 to sra-9 clustered. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00001964 | ||||||||
| WBStrain00033334 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052871 | ||||||||
| 00052872 | |||||||||
| 00052873 | |||||||||
| 00052874 | |||||||||
| 00052875 | |||||||||
| 00052876 | |||||||||
| 00113455 | |||||||||
| 00113456 | |||||||||
| 00113457 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (34) | |||||||||
| Structured_description | Concise_description | sra-4 encodes a predicted chemosensory receptor. | Paper_evidence | WBPaper00002314 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 08 Oct 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | AH6.8 | |||||||
| Corresponding_transcript | AH6.8.1 | ||||||||
| Associated_feature | WBsf979054 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00027932 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009535 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038626 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5008 | ||||||||
| Expr13999 | |||||||||
| Expr1017274 | |||||||||
| Expr1142834 | |||||||||
| Expr2016154 | |||||||||
| Drives_construct | WBCnstr00002749 | ||||||||
| WBCnstr00035255 | |||||||||
| Construct_product | WBCnstr00035255 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (26) | |||||||||
| Interaction | WBInteraction000266841 | ||||||||
| WBInteraction000323631 | |||||||||
| WBInteraction000343445 | |||||||||
| WBInteraction000362327 | |||||||||
| WBInteraction000411783 | |||||||||
| Map_info | Map | II | Position | 1.53201 | Error | 0.002597 | |||
| Positive | Positive_clone | AH6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00005965 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00024667 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
