WormBase Tree Display for Gene: WBGene00005193

WBGene00005193 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: CGC_name: srg-36 Person_evidence: WBPerson42
      Sequence_name: K04C1.6
      Molecular_name: K04C1.6
        K04C1.6.1
        CE18849
      Other_name: CELE_K04C1.6 Accession_evidence: NDB BX284606
      Public_name: srg-36
    DB_info: Database: AceView gene XO848
        WormQTL gene WBGene00005193
        WormFlux gene WBGene00005193
        NDB locus_tag CELE_K04C1.6
        Panther gene CAEEL|WormBase=WBGene00005193|UniProtKB=G5EEF5
          family PTHR31552
        NCBI gene 186981
        RefSeq protein NM_077969.2
        TREEFAM TREEFAM_ID TF352435
        TrEMBL UniProtAcc G5EEF5
        UniProt_GCRP UniProtAcc G5EEF5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srg
    Allele (101)
    Strain: WBStrain00055378
    RNASeq_FPKM (74)
    GO_annotation: 00016060
      00016061
      00016062
      00016063
      00113667
      00113668
      00113669
    Ortholog (32)
    Paralog (17)
    Structured_description: Concise_description: srg-36 encodes a G-protein coupled receptor (GPCR) of the serpentine receptor class g (srg) which is involved in perception of ascarosides, which are the major small-molecule components of the dauer pheromone and regulate developmental diapause (dauer), olfactory learning, social behaviors and life-span; srg-36 functions redundantly with srg-37 in the perception of ascaroside C3 to regulate dauer development; srg-36 and srg-37 are localized to the sensory cilia of the ASI chemosensory neuron. Paper_evidence: WBPaper00040097
          Curator_confirmed: WBPerson324
          Date_last_updated: 16 Sep 2013 00:00:00
      Automated_description: Predicted to enable transmembrane signaling receptor activity. Involved in dauer larval development. Located in non-motile cilium. Expressed in ASIL; ASIR; and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K04C1.6
    Corresponding_transcript: K04C1.6.1
    Other_sequence: JI169728.1
      JI165249.1
      JI169442.1
    Associated_feature: WBsf1024370
  Experimental_info: RNAi_result: WBRNAi00016580 Inferred_automatically: RNAi_primary
      WBRNAi00016584 Inferred_automatically: RNAi_primary
      WBRNAi00049887 Inferred_automatically: RNAi_primary
      WBRNAi00049882 Inferred_automatically: RNAi_primary
      WBRNAi00033939 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9604
      Expr10998
      Expr13660
      Expr16048
      Expr1013942
      Expr1153592
    Drives_construct: WBCnstr00014166
      WBCnstr00035134
      WBCnstr00042736
    Construct_product: WBCnstr00014166
      WBCnstr00014168
      WBCnstr00017612
      WBCnstr00035134
      WBCnstr00039932
      WBCnstr00042736
    Microarray_results (21)
    Expression_cluster (30)
    Interaction (169)
    WBProcess: WBbiopr:00000025
  Map_info: Map: X Position: 16.67
    Positive: Positive_clone: K04C1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00040097
    WBPaper00056761
    WBPaper00058008
    WBPaper00058761
    WBPaper00059668
    WBPaper00061168
    WBPaper00061671
    WBPaper00062173
    WBPaper00065565
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene