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WormBase Tree Display for Gene: WBGene00005194

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Name Class

WBGene00005194SMapS_parentSequenceK04C1
IdentityVersion1
NameCGC_namesrg-37Person_evidenceWBPerson42
Sequence_nameK04C1.1
Molecular_nameK04C1.1
K04C1.1.1
CE53414
Other_nameCELE_K04C1.1Accession_evidenceNDBBX284606
Public_namesrg-37
DB_infoDatabaseAceViewgeneXO852
WormQTLgeneWBGene00005194
WormFluxgeneWBGene00005194
NDBlocus_tagCELE_K04C1.1
PanthergeneCAEEL|WormBase=WBGene00005194|UniProtKB=G3MU03
familyPTHR31552
NCBIgene186978
RefSeqproteinNM_001373569.1
TrEMBLUniProtAccG3MU03
UniProt_GCRPUniProtAccG3MU03
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:37WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrg
Allele (28)
RNASeq_FPKM (74)
GO_annotation00009018
00009019
00009020
00113670
00113671
00113672
OrthologWBGene00056955Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00066690Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00090539Pristionchus pacificusFrom_analysisInparanoid_8
CSP26.g17231Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g2299Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP40.g14656Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Csp5_scaffold_00703.g14583Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02456Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023095Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00083851Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (37)
Structured_descriptionConcise_descriptionsrg-37 encodes a G-protein coupled receptor (GPCR) of the serpentine receptor class g (srg) which is involved in perception of ascarosides, which are the major small-molecule components of the dauer pheromone and regulate developmental diapause (dauer), olfactory learning, social behaviors and life-span; srg-37 functions redundantly with srg-36 in the perception of ascaroside C3 to regulate dauer development; srg-37 and srg-36 are localized to the sensory cilia of the ASI chemosensory neuron.Curator_confirmedWBPerson324
Date_last_updated16 Sep 2013 00:00:00
Automated_descriptionPredicted to enable transmembrane signaling receptor activity. Involved in dauer larval development. Predicted to be located in membrane. Expressed in ASIL and ASIR.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK04C1.1
Corresponding_CDS_historyK04C1.1:wp271
K04C1.1a:wp252
K04C1.1b:wp252
Corresponding_transcriptK04C1.1.1
Associated_featureWBsf1024371
Experimental_infoRNAi_resultWBRNAi00016580Inferred_automaticallyRNAi_primary
WBRNAi00049882Inferred_automaticallyRNAi_primary
Expr_patternExpr9605
Expr1022199
Expr1153587
Expr2034558
Drives_constructWBCnstr00014167
WBCnstr00035133
Construct_productWBCnstr00014167
WBCnstr00035133
Microarray_results (17)
Expression_cluster (36)
Interaction (85)
WBProcessWBbiopr:00000025
Map_infoMapXPosition16.6701
PositivePositive_cloneK04C1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (11)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene