WormBase Tree Display for Gene: WBGene00005241
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| WBGene00005241 | SMap | S_parent | Sequence | F55C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-16 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F55C5.9 | ||||||||
| Molecular_name | F55C5.9 | ||||||||
| F55C5.9.1 | |||||||||
| CE33111 | |||||||||
| Other_name | CELE_F55C5.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-16 | ||||||||
| DB_info | Database | AceView | gene | 5M773 | |||||
| WormQTL | gene | WBGene00005241 | |||||||
| WormFlux | gene | WBGene00005241 | |||||||
| NDB | locus_tag | CELE_F55C5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005241|UniProtKB=Q20814 | |||||||
| family | PTHR46891 | ||||||||
| NCBI | gene | 186287 | |||||||
| RefSeq | protein | NM_073683.3 | |||||||
| TREEFAM | TREEFAM_ID | TF342964 | |||||||
| TrEMBL | UniProtAcc | Q20814 | |||||||
| UniProt_GCRP | UniProtAcc | Q20814 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00032940 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069232 | ||||||||
| Ortholog (11) | |||||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55C5.9 | |||||||
| Corresponding_CDS_history | F55C5.9:wp93 | ||||||||
| Corresponding_transcript | F55C5.9.1 | ||||||||
| Associated_feature | WBsf661877 | ||||||||
| WBsf1001551 | |||||||||
| WBsf1001552 | |||||||||
| WBsf1020551 | |||||||||
| WBsf232628 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032867 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00066674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066587 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048475 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013044 | ||||||||
| Expr1152267 | |||||||||
| Expr2016397 | |||||||||
| Expr2034609 | |||||||||
| Drives_construct | WBCnstr00035097 | ||||||||
| Construct_product | WBCnstr00035097 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (65) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | V | Position | 3.98914 | Error | 0.002069 | |||
| Positive | Positive_clone | F55C5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003921 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
