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WormBase Tree Display for Gene: WBGene00005477

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Name Class

WBGene00005477SMapS_parentSequenceW02H5
IdentityVersion1
NameCGC_namesrh-271Person_evidenceWBPerson522
Sequence_nameW02H5.6
Molecular_nameW02H5.6a
W02H5.6a.1
CE28418
W02H5.6b
Other_nameW02H5.cCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_W02H5.6Accession_evidenceNDBBX284605
Public_namesrh-271
DB_infoDatabaseAceViewgene5D96
WormQTLgeneWBGene00005477
WormFluxgeneWBGene00005477
NDBlocus_tagCELE_W02H5.6
PanthergeneCAEEL|WormBase=WBGene00005477|UniProtKB=Q9N5D1
familyPTHR22941
NCBIgene189138
RefSeqproteinNM_071317.4
NR_133612.1
TrEMBLUniProtAccQ9N5D1
UniProt_GCRPUniProtAccQ9N5D1
RNAcentralURSidURS00008DEB35
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:38WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrh
Allele (150)
RNASeq_FPKM (74)
GO_annotation00095330
Ortholog (14)
Paralog (297)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW02H5.6a
Corresponding_transcriptW02H5.6b
W02H5.6a.1
Associated_featureWBsf233423
Experimental_infoRNAi_resultWBRNAi00036208Inferred_automaticallyRNAi_primary
WBRNAi00006852Inferred_automaticallyRNAi_primary
WBRNAi00054634Inferred_automaticallyRNAi_primary
WBRNAi00019519Inferred_automaticallyRNAi_primary
Expr_patternExpr1021126
Expr1158183
Expr2016463
Expr2034664
Drives_constructWBCnstr00034945
Construct_productWBCnstr00034945
Microarray_results (20)
Expression_cluster (49)
Map_infoMapVPosition-13.54Error0.057092
PositivePositive_cloneW02H5Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene