WormBase Tree Display for Gene: WBGene00005548
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| WBGene00005548 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F33H12 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-36 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F33H12.5 | ||||||||
| Molecular_name | F33H12.5a | ||||||||
| F33H12.5a.1 | |||||||||
| CE25868 | |||||||||
| F33H12.5b | |||||||||
| CE54549 | |||||||||
| F33H12.5b.1 | |||||||||
| Other_name | CELE_F33H12.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sri-36 | ||||||||
| DB_info | Database | AceView | gene | 2C870 | |||||
| WormQTL | gene | WBGene00005548 | |||||||
| WormFlux | gene | WBGene00005548 | |||||||
| NDB | locus_tag | CELE_F33H12.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005548|UniProtKB=O44841 | |||||||
| family | PTHR45830 | ||||||||
| NCBI | gene | 191910 | |||||||
| RefSeq | protein | NM_001420587.1 | |||||||
| NM_061899.2 | |||||||||
| TrEMBL | UniProtAcc | O44841 | |||||||
| A0A8S4SRB2 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A8S4SRB2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sri | ||||||||
| Allele (60) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033512 | ||||||||
| Ortholog (15) | |||||||||
| Paralog (293) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in PVT; head ganglion; pharyngeal-intestinal valve; and pharynx. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F33H12.5a | |||||||
| F33H12.5b | |||||||||
| Corresponding_transcript | F33H12.5a.1 | ||||||||
| F33H12.5b.1 | |||||||||
| Associated_feature | WBsf986978 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014263 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103322 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046235 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14099 | ||||||||
| Expr1021274 | |||||||||
| Expr1150123 | |||||||||
| Drives_construct | WBCnstr00034892 | ||||||||
| Construct_product | WBCnstr00034892 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction | WBInteraction000446470 | ||||||||
| Map_info | Map | II | Position | -12.3933 | Error | 0.013186 | |||
| Positive | Positive_clone | F33H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
