WormBase Tree Display for Gene: WBGene00005654

WBGene00005654 SMap: S_parent: Sequence: F36D3
  Identity: Version: 1
    Name: CGC_name: srr-3 Person_evidence: WBPerson522
      Sequence_name: F36D3.3
      Molecular_name: F36D3.3
        F36D3.3.1
        CE15967
      Other_name: CELE_F36D3.3 Accession_evidence: NDB BX284605
      Public_name: srr-3
    DB_info: Database: AceView gene 5Q986
        WormQTL gene WBGene00005654
        WormFlux gene WBGene00005654
        NDB locus_tag CELE_F36D3.3
        Panther gene CAEEL|WormBase=WBGene00005654|UniProtKB=O45459
          family PTHR31930
        NCBI gene 185351
        RefSeq protein NM_074779.5
        TREEFAM TREEFAM_ID TF318504
        TrEMBL UniProtAcc O45459
        UniProt_GCRP UniProtAcc O45459
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srr
    Allele (80)
    RNASeq_FPKM (74)
    GO_annotation: 00034531
    Ortholog (23)
    Paralog: WBGene00005652 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00005653 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00005655 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00005656 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00005657 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00005659 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00005660 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00005661 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00005658 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in several structures, including RMD; anal depressor muscle; head mesodermal cell; pharyngeal-intestinal valve; and phasmid neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36D3.3
    Corresponding_transcript: F36D3.3.1
  Experimental_info: RNAi_result: WBRNAi00046472 Inferred_automatically: RNAi_primary
      WBRNAi00014402 Inferred_automatically: RNAi_primary
      WBRNAi00031847 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14126
      Expr1019363
      Expr1150350
      Expr2016613
      Expr2034804
    Drives_construct: WBCnstr00034818
    Construct_product: WBCnstr00034818
    Microarray_results (19)
    Expression_cluster (67)
    Interaction: WBInteraction000303740
  Map_info: Map: V Position: 10.2078 Error: 0.008526
    Positive: Positive_clone: F36D3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033099
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene