WormBase Tree Display for Gene: WBGene00005931
expand all nodes | collapse all nodes | view schema
| WBGene00005931 | SMap | S_parent | Sequence | T06E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | fbxa-199 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T06E6.3 | ||||||||
| Molecular_name | T06E6.3 | ||||||||
| T06E6.3.1 | |||||||||
| CE40779 | |||||||||
| Other_name | srx-40 | Person_evidence | WBPerson522 | ||||||
| CELE_T06E6.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | fbxa-199 | ||||||||
| DB_info | Database | AceView | gene | 5P878 | |||||
| WormQTL | gene | WBGene00005931 | |||||||
| WormFlux | gene | WBGene00005931 | |||||||
| NDB | locus_tag | CELE_T06E6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005931|UniProtKB=O45758 | |||||||
| family | PTHR23017 | ||||||||
| NCBI | gene | 188182 | |||||||
| RefSeq | protein | NM_074426.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315574 | |||||||
| TrEMBL | UniProtAcc | O45758 | |||||||
| UniProt_GCRP | UniProtAcc | O45758 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 24 Feb 2006 13:37:43 | WBPerson1983 | Event | Split_into | WBGene00044759 | ||||
| 3 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-199 | ||||
| Other_name | srx-40 | ||||||||
| Split_into | WBGene00044759 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00055318 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00035157 | ||||||||
| Ortholog (54) | |||||||||
| Paralog (96) | |||||||||
| Structured_description | Concise_description | srx-40 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06E6.3 | |||||||
| Corresponding_CDS_history | T06E6.3:wp155 | ||||||||
| T06E6.3:wp172 | |||||||||
| Corresponding_transcript | T06E6.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018309 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1018889 | ||||||||
| Expr1156273 | |||||||||
| Expr2011512 | |||||||||
| Expr2029749 | |||||||||
| Drives_construct | WBCnstr00034650 | ||||||||
| Construct_product | WBCnstr00034650 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | V | Position | 8.03217 | Error | 0.011919 | |||
| Positive | Positive_clone | T06E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4246 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
