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WormBase Tree Display for Gene: WBGene00006127

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Name Class

WBGene00006127SMapS_parentSequenceT28A11
IdentityVersion1
NameCGC_namestr-64Person_evidenceWBPerson42
Sequence_nameT28A11.1
Molecular_nameT28A11.1
T28A11.1.1
CE14281
Other_nameCELE_T28A11.1Accession_evidenceNDBBX284605
Public_namestr-64
DB_infoDatabaseAceViewgene5D757
WormQTLgeneWBGene00006127
WormFluxgeneWBGene00006127
NDBlocus_tagCELE_T28A11.1
PanthergeneCAEEL|WormBase=WBGene00006127|UniProtKB=P91524
familyPTHR46178
NCBIgene191982
RefSeqproteinNM_071506.3
TrEMBLUniProtAccP91524
UniProt_GCRPUniProtAccP91524
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:39WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classstr
Allele (83)
RNASeq_FPKM (74)
GO_annotation00051255
OrthologWBGene00139422Caenorhabditis brenneriFrom_analysisOMA
WBGene00143812Caenorhabditis brenneriFrom_analysisOMA
WBGene00146309Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00153998Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00082047Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00116958Pristionchus pacificusFrom_analysisInparanoid_8
Csp5_scaffold_01200.g19196Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12629Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_020742Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g13697Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (267)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST28A11.1
Corresponding_transcriptT28A11.1.1
Experimental_infoRNAi_resultWBRNAi00010887Inferred_automaticallyRNAi_primary
WBRNAi00040759Inferred_automaticallyRNAi_primary
WBRNAi00019353Inferred_automaticallyRNAi_primary
WBRNAi00054351Inferred_automaticallyRNAi_primary
Expr_patternExpr1157897
Drives_constructWBCnstr00034522
Construct_productWBCnstr00034522
Microarray_results (15)
Expression_cluster (22)
InteractionWBInteraction000222950
WBInteraction000274621
WBInteraction000322732
WBInteraction000329117
WBInteraction000386231
Map_infoMapVPosition-12.3446Error0.010795
PositivePositive_cloneT28A11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00013489
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene