WormBase Tree Display for Gene: WBGene00006127
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WBGene00006127 | SMap | S_parent | Sequence | T28A11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | str-64 | Person_evidence | WBPerson42 | |||||
Sequence_name | T28A11.1 | ||||||||
Molecular_name | T28A11.1 | ||||||||
T28A11.1.1 | |||||||||
CE14281 | |||||||||
Other_name | CELE_T28A11.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | str-64 | ||||||||
DB_info | Database | AceView | gene | 5D757 | |||||
WormQTL | gene | WBGene00006127 | |||||||
WormFlux | gene | WBGene00006127 | |||||||
NDB | locus_tag | CELE_T28A11.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006127|UniProtKB=P91524 | |||||||
family | PTHR46178 | ||||||||
NCBI | gene | 191982 | |||||||
RefSeq | protein | NM_071506.3 | |||||||
TrEMBL | UniProtAcc | P91524 | |||||||
UniProt_GCRP | UniProtAcc | P91524 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | str | ||||||||
Allele (83) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00051255 | ||||||||
Ortholog | WBGene00139422 | Caenorhabditis brenneri | From_analysis | OMA | |||||
WBGene00143812 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
WBGene00146309 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
WormBase-Compara | |||||||||
WBGene00153998 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
WormBase-Compara | |||||||||
WBGene00082047 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00116958 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
Csp5_scaffold_01200.g19196 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_12629 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_020742 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g13697 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (267) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T28A11.1 | |||||||
Corresponding_transcript | T28A11.1.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00010887 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040759 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019353 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054351 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1157897 | ||||||||
Drives_construct | WBCnstr00034522 | ||||||||
Construct_product | WBCnstr00034522 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (22) | |||||||||
Interaction | WBInteraction000222950 | ||||||||
WBInteraction000274621 | |||||||||
WBInteraction000322732 | |||||||||
WBInteraction000329117 | |||||||||
WBInteraction000386231 | |||||||||
Map_info | Map | V | Position | -12.3446 | Error | 0.010795 | |||
Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00013489 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |