WormBase Tree Display for Gene: WBGene00006315
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| WBGene00006315 | SMap | S_parent | Sequence | F58G1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sup-6 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F58G1.10 | ||||||||
| Molecular_name | F58G1.10 | ||||||||
| Other_name | U1 | ||||||||
| CELE_F58G1.10 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | sup-6 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_F58G1.10 | |||||
| NCBI | gene | 260121 | |||||||
| RefSeq | protein | NR_000900.1 | |||||||
| RNAcentral | URSid | URS000011EF6F | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 10 Aug 2004 15:04:01 | WBPerson713 | Event | Acquires_merge | WBGene00014412 | ||||
| Acquires_merge | WBGene00014412 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001268 | |||||||
| Gene_class | sup | ||||||||
| Reference_allele | WBVar00248703 | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar01498828 | |||||||||
| WBVar01498829 | |||||||||
| WBVar00248703 | |||||||||
| WBVar01498941 | |||||||||
| Legacy_information | st19dm : dominant suppressor of unc-13(e309) recessive lethal; does not suppress amber or ochre alleles of unc-54. ES3. | ||||||||
| [C.elegansII] st19dm : dominant suppressor of unc-13(e309); recessive lethal; also suppresses certain daf mutations; does not suppress amber or ochre alleles of unc-54. ES3. [PD; RW] | |||||||||
| Strain | WBStrain00004361 | ||||||||
| WBStrain00004432 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | sup-6 encodes a U1 snRNA required for development to adulthood;sup-6(st19) mutants arrest as late larvae; the sup-6(st19) mutation is adominant, allele-specific suppressor of unc-13(e309), an intronic+1G-to-A transition in unc-13; sup-6(st19) is otherwise recessive, withno obvious phenotype in heterozygotes. | Paper_evidence | WBPaper00013745 | |||||
| WBPaper00024366 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 04 Dec 2006 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including daf-12; rrf-3; and pgl-1 based on tiling array and RNA-seq studies. Is affected by Tunicamycin and sodium arsenite based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | F58G1.10 | |||||||
| Experimental_info | RNAi_result | WBRNAi00063634 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022286 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033126 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076128 | Inferred_automatically | RNAi_primary | |||||||
| Expression_cluster (21) | |||||||||
| Interaction | WBInteraction000005323 | ||||||||
| WBInteraction000052948 | |||||||||
| WBInteraction000518868 | |||||||||
| WBInteraction000518950 | |||||||||
| Map_info | Map | II | Position | 12.5245 | Error | 0.096794 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F58G1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 267 | |||||||
| 271 | |||||||||
| Multi_point | 4247 | ||||||||
| 4674 | |||||||||
| Landmark_gene | |||||||||
| Reference | WBPaper00013745 | ||||||||
| WBPaper00024123 | |||||||||
| WBPaper00024366 | |||||||||
| WBPaper00027229 | |||||||||
| WBPaper00027255 | |||||||||
| WBPaper00054464 | |||||||||
| WBPaper00061804 | |||||||||
| WBPaper00062110 | |||||||||
| WBPaper00063335 | |||||||||
| WBPaper00064201 | |||||||||
| Method | Gene |
