WormBase Tree Display for Gene: WBGene00006316
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| WBGene00006316 | SMap | S_parent | Sequence | C03B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | sup-7 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C03B1.t1 | ||||||||
| Molecular_name | C03B1.t1 | ||||||||
| Other_name | rtw-2 | ||||||||
| CELE_C03B1.T1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | sup-7 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_C03B1.T1 | |||||
| NCBI | gene | 192049 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001272 | |||||||
| Gene_class | sup | ||||||||
| Reference_allele | WBVar00248701 | ||||||||
| Allele | WBVar00248701 | Inferred_automatically | From strain object: CB4050 | ||||||
| From strain object: DR478 | |||||||||
| From strain object: DR497 | |||||||||
| From strain object: DR508 | |||||||||
| From strain object: RW2070 | |||||||||
| WBVar00144675 | |||||||||
| WBVar02147894 | |||||||||
| WBVar01500067 | |||||||||
| Legacy_information | st5sd : strong amber suppressor partially or completely suppresses amber alleles of more than forty different genes; slow growing or sterile at < 22x grows best at 23x suppression strongest at low temperature; otherwise no gross phenotype alone; alteration in tRNATrp anticodon. ES3 in presence of unc-13(e450) etc. ME2. NA6 all identical to st7. | ||||||||
| See also e2254 | |||||||||
| [C.elegansII] st5sd : strong amber suppressor, partially or completely suppresses amber alleles of more than forty different genes; slow growing or sterile below 22C, grows best at 23C; suppression strongest at low temperature; otherwise no gross phenotype alone; alteration in tRNATrp anticodon. ES3 in presence of unc-13(e450) etc. ME2. OA5 all identical to st5. Corresponds to rtw-2. [Waterston 1981; Wills et al. 1983] | |||||||||
| Strain | WBStrain00033509 | ||||||||
| WBStrain00004533 | |||||||||
| WBStrain00006271 | |||||||||
| WBStrain00006273 | |||||||||
| WBStrain00006274 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | sup-7 encodes a tryptophan tRNA; mutations were identified as informational suppressors that suppressed the same alleles as sup-5. | Paper_evidence | WBPaper00000515 | |||||
| WBPaper00000768 | |||||||||
| WBPaper00001009 | |||||||||
| WBPaper00001064 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 11 Jul 2005 00:00:00 | ||||||||
| Automated_description | Expressed in several structures, including body wall musculature; hermaphrodite gonad; hypodermis; intestine; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C03B1.t1 | |||||||
| Experimental_info | Expr_pattern | Expr13219 | |||||||
| Construct_product | WBCnstr00000213 | ||||||||
| WBCnstr00015911 | |||||||||
| Interaction | WBInteraction000000016 | ||||||||
| WBInteraction000000026 | |||||||||
| WBInteraction000000027 | |||||||||
| WBInteraction000000028 | |||||||||
| WBInteraction000000030 | |||||||||
| WBInteraction000000031 | |||||||||
| WBInteraction000000042 | |||||||||
| WBInteraction000000080 | |||||||||
| WBInteraction000000148 | |||||||||
| WBInteraction000000161 | |||||||||
| WBInteraction000000162 | |||||||||
| WBInteraction000000241 | |||||||||
| WBInteraction000000268 | |||||||||
| WBInteraction000000322 | |||||||||
| WBInteraction000000337 | |||||||||
| WBInteraction000000339 | |||||||||
| WBInteraction000000776 | |||||||||
| WBInteraction000001084 | |||||||||
| WBInteraction000001602 | |||||||||
| WBInteraction000002471 | |||||||||
| WBInteraction000002480 | |||||||||
| WBInteraction000002481 | |||||||||
| WBInteraction000002498 | |||||||||
| WBInteraction000002499 | |||||||||
| WBInteraction000005324 | |||||||||
| WBInteraction000005325 | |||||||||
| WBInteraction000030347 | |||||||||
| WBInteraction000030350 | |||||||||
| WBInteraction000030374 | |||||||||
| WBInteraction000030856 | |||||||||
| WBInteraction000031034 | |||||||||
| WBInteraction000031052 | |||||||||
| WBInteraction000031066 | |||||||||
| WBInteraction000031478 | |||||||||
| WBInteraction000031693 | |||||||||
| WBInteraction000031761 | |||||||||
| WBInteraction000031783 | |||||||||
| WBInteraction000031784 | |||||||||
| WBInteraction000031785 | |||||||||
| WBInteraction000031786 | |||||||||
| WBInteraction000031787 | |||||||||
| WBInteraction000031788 | |||||||||
| WBInteraction000031789 | |||||||||
| WBInteraction000031790 | |||||||||
| WBInteraction000031791 | |||||||||
| WBInteraction000031792 | |||||||||
| WBInteraction000052423 | |||||||||
| WBInteraction000519006 | |||||||||
| WBInteraction000519037 | |||||||||
| Map_info | Map | X | Position | -2.93854 | Error | 0.057047 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone (2) | ||||||||
| Negative | Outside_rearr | mcDf2 | |||||||
| Mapping_data | Multi_point | 880 | |||||||
| Pos_neg_data | 3191 | ||||||||
| 941 | |||||||||
| Reference (119) | |||||||||
| Method | Gene |
