WormBase Tree Display for Gene: WBGene00006342
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| WBGene00006342 | SMap | S_parent | Sequence | C01B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sup-37 | Paper_evidence | WBPaper00041001 | |||||
| Person_evidence | WBPerson261 | ||||||||
| Sequence_name | C01B7.1 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | ztf-12 | Person_evidence | WBPerson1997 | ||||||
| CELE_C01B7.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | sup-37 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00006342 | |||||
| NDB | locus_tag | CELE_C01B7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006342|UniProtKB=H2KYB3 | |||||||
| family | PTHR24403 | ||||||||
| NCBI | gene | 179257 | |||||||
| RefSeq | protein | NM_001269181.4 | |||||||
| NM_171493.8 | |||||||||
| NM_001383359.1 | |||||||||
| NM_001380714.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF350405 | |||||||
| TrEMBL | UniProtAcc | H2KYB3 | |||||||
| Q8MNV9 | |||||||||
| H2KYB2 | |||||||||
| I7K4K0 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYB3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 11 May 2012 15:24:32 | WBPerson2970 | Event | Acquires_merge | WBGene00015274 | ||||
| Name_change | Sequence_name | C01B7.1 | |||||||
| Other_name | ztf-12 | ||||||||
| Acquires_merge | WBGene00015274 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sup | ||||||||
| Allele (103) | |||||||||
| Legacy_information | See also e2214, e2215, e2216 | ||||||||
| [Schnabel et al] recessive suppressor of ts alleles of pha-1(e2123 and t1001). No other phenotype. NA 8. Linkage group V, no precise map position. | |||||||||
| [C.elegansII] e2214 : recessive suppressor of ts alleles of pha-1(e2123 and t1001). No other phenotype. OA7: e2215, e2216, etc.. [Schnabel et al. 1991] | |||||||||
| Strain | WBStrain00005856 | ||||||||
| WBStrain00007731 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021500 | ||||||||
| 00021501 | |||||||||
| 00021502 | |||||||||
| 00021503 | |||||||||
| 00021504 | |||||||||
| 00021505 | |||||||||
| 00021506 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Involved in embryonic digestive tract morphogenesis. Located in nucleus. Expressed in neurons; pharynx; and spermatheca. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01B7.1a | |||||||
| C01B7.1b | |||||||||
| C01B7.1c | |||||||||
| C01B7.1d | |||||||||
| Corresponding_CDS_history | C01B7.1d:wp261 | ||||||||
| Corresponding_transcript | C01B7.1a.1 | ||||||||
| C01B7.1a.2 | |||||||||
| C01B7.1b.1 | |||||||||
| C01B7.1b.2 | |||||||||
| C01B7.1c.1 | |||||||||
| C01B7.1c.2 | |||||||||
| C01B7.1d.1 | |||||||||
| Other_sequence (44) | |||||||||
| Associated_feature (27) | |||||||||
| Transcription_factor | WBTranscriptionFactor001126 | ||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr4699 | ||||||||
| Expr10043 | |||||||||
| Expr10471 | |||||||||
| Expr10472 | |||||||||
| Expr1032556 | |||||||||
| Expr1143400 | |||||||||
| Expr2017132 | |||||||||
| Expr2035268 | |||||||||
| Drives_construct (13) | |||||||||
| Construct_product | WBCnstr00014852 | ||||||||
| WBCnstr00014853 | |||||||||
| WBCnstr00014855 | |||||||||
| WBCnstr00019913 | |||||||||
| WBCnstr00019914 | |||||||||
| WBCnstr00021820 | |||||||||
| WBCnstr00034395 | |||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (17) | |||||||||
| Anatomy_function | WBbtf0733 | ||||||||
| WBbtf0734 | |||||||||
| Map_info | Map | V | Position | 1.60922 | |||||
| Positive | Positive_clone | C01B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
